Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 MTCO3P7-201ENST00000510008 774 ntBASIC0.29□□□□□ -2.36
FOXA3P55318 AC010587.2-201ENST00000511727 448 ntBASIC0.29□□□□□ -2.36
FOXA3P55318 RNU6-229P-201ENST00000516614 102 ntBASIC0.29□□□□□ -2.36
FOXA3P55318 AP001893.2-201ENST00000526949 202 ntBASIC0.29□□□□□ -2.36
FOXA3P55318 MIR4714-201ENST00000580728 77 ntBASIC0.29□□□□□ -2.36
FOXA3P55318 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.29□□□□□ -2.36
FOXA3P55318 CTHRC1P1-201ENST00000605383 469 ntBASIC0.29□□□□□ -2.36
FOXA3P55318 AL353149.1-201ENST00000610667 244 ntBASIC0.29□□□□□ -2.36
FOXA3P55318 AC012409.4-201ENST00000612923 249 ntBASIC0.29□□□□□ -2.36
FOXA3P55318 Y_RNA.132-201ENST00000363421 102 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 SNORA33-201ENST00000363664 130 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 SNORA72.2-201ENST00000365028 127 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 RNU6-945P-201ENST00000383947 107 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 Y_RNA.465-201ENST00000384293 102 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 RNU6-1026P-201ENST00000384465 108 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 ERHP2-201ENST00000402323 299 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 RPS20P2-201ENST00000402520 389 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 MTCYBP2-201ENST00000407745 171 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 RNU6-1245P-201ENST00000411130 106 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 RNU6-293P-201ENST00000411259 106 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 HIGD1AP15-201ENST00000416198 280 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.28□□□□□ -2.36
FOXA3P55318 AC010975.2-201ENST00000427781 588 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.28□□□□□ -2.36
FOXA3P55318 AC244670.1-201ENST00000436879 112 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 MTCYBP39-201ENST00000437562 491 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 MTND5P2-201ENST00000442927 1142 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AC007395.1-201ENST00000451333 677 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.28□□□□□ -2.36
FOXA3P55318 AC016925.1-201ENST00000458303 298 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 RPS29P1-201ENST00000465274 159 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 HMGN1P12-201ENST00000499125 195 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 RBBP4P6-201ENST00000508098 202 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 MTND3P25-201ENST00000509243 135 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AC011406.1-201ENST00000512440 370 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.28□□□□□ -2.36
FOXA3P55318 RNU7-51P-201ENST00000516560 62 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 APOOP3-201ENST00000536787 586 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.28□□□□□ -2.36
FOXA3P55318 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.28□□□□□ -2.36
FOXA3P55318 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.28□□□□□ -2.36
FOXA3P55318 MIR4742-201ENST00000581069 85 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AL606834.3-201ENST00000602615 496 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AC144521.1-201ENST00000607148 956 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AL121895.2-201ENST00000619558 447 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 AC103706.2-201ENST00000638080 240 ntBASIC0.28□□□□□ -2.36
FOXA3P55318 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
FOXA3P55318 RNU6-545P-201ENST00000362681 104 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 U3.9-201ENST00000363823 204 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 RNU6-105P-201ENST00000363909 104 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 Y_RNA.363-201ENST00000365529 113 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 RNU6-969P-201ENST00000383900 105 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 RNU6-43P-201ENST00000384302 107 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 RNU6-378P-201ENST00000384324 107 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 SNORA80D-201ENST00000384488 135 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 RNU6-692P-201ENST00000384496 107 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.27□□□□□ -2.37
FOXA3P55318 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.27□□□□□ -2.37
FOXA3P55318 AC010154.1-201ENST00000425857 269 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC000111.3-201ENST00000433478 193 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC073614.1-201ENST00000438690 650 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.27□□□□□ -2.37
FOXA3P55318 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.27□□□□□ -2.37
FOXA3P55318 GAPDHP17-201ENST00000449858 1001 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 C1DP4-201ENST00000455429 424 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 SNRPFP3-201ENST00000457792 225 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.27□□□□□ -2.37
FOXA3P55318 FABP5P5-201ENST00000515537 406 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 RNU6-947P-201ENST00000516264 106 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 RNU6-922P-201ENST00000516753 99 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC011979.2-201ENST00000527568 352 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC068587.4-201ENST00000533893 186 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC090888.2-201ENST00000559765 1144 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.27□□□□□ -2.37
FOXA3P55318 TPRKBP2-201ENST00000565969 475 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 MIR3923-201ENST00000579521 83 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 MIR3118-1-201ENST00000581787 76 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 MIR4307-201ENST00000582802 84 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 MIR4781-201ENST00000585250 76 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC008752.3-201ENST00000588113 712 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AL929325.1-201ENST00000603096 117 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 MTND3P19-201ENST00000603825 345 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AP002360.4-201ENST00000606980 481 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AP000943.4-201ENST00000622912 357 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC106754.2-201ENST00000623006 233 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 SNORD3E-202ENST00000627253 216 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 U4.7-201ENST00000638126 106 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 MTND4P14-201ENST00000435799 1354 ntBASIC0.27□□□□□ -2.37
FOXA3P55318 AC073343.1-201ENST00000328239 651 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 RNA5SP347-201ENST00000362445 119 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 U3.8-201ENST00000363675 217 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 RNU4-56P-201ENST00000364700 142 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 SNORA50A-201ENST00000384225 134 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 RNA5SP109-201ENST00000391010 116 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 AF228730.1-201ENST00000397972 663 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 RNA5SP201-201ENST00000410316 124 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 EEF1A1P40-201ENST00000412883 573 ntBASIC0.26□□□□□ -2.37
FOXA3P55318 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms