| FOXG1 | P55316 | RPS20P22-201 | ENST00000473700 | 357 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | RPS29P26-201 | ENST00000477483 | 171 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | AL160314.1-201 | ENST00000490836 | 438 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | SNORA64.4-201 | ENST00000516632 | 81 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | RNU6-572P-201 | ENST00000516724 | 80 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | RNA5SP290-201 | ENST00000517133 | 127 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | ATP5F1P5-201 | ENST00000526403 | 760 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | AP001318.2-201 | ENST00000533378 | 492 nt | TSL 3 BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | AL645944.1-201 | ENST00000603857 | 493 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | MIR663AHG-231 | ENST00000609044 | 590 nt | TSL 5 BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | AC097372.5-201 | ENST00000623665 | 376 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | AC073476.4-201 | ENST00000628409 | 72 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | PSMD5-AS1-215 | ENST00000640622 | 205 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | MCMDC2-207 | ENST00000492775 | 1831 nt | TSL 1 (best) BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | AL353743.1-202 | ENST00000431724 | 1695 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | AC233981.2-201 | ENST00000611524 | 1614 nt | BASIC | 2.71 | □□□□□ -1.97 | | |
| FOXG1 | P55316 | MARCH7-202 | ENST00000409175 | 2402 nt | APPRIS P1 TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC022336.2-201 | ENST00000568966 | 2538 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SYNE1-212 | ENST00000423061 | 27436 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU4-90P-201 | ENST00000362773 | 141 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | Y_RNA.122-201 | ENST00000363331 | 96 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | Y_RNA.292-201 | ENST00000364904 | 97 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-318P-201 | ENST00000384283 | 103 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SNORA1.3-201 | ENST00000384676 | 136 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SNORD15B-201 | ENST00000384714 | 146 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | MIR34A-201 | ENST00000385130 | 110 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | MIR493-201 | ENST00000385254 | 89 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SNORA48.5-201 | ENST00000391143 | 135 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-1197P-201 | ENST00000391183 | 107 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AL024508.1-201 | ENST00000432477 | 505 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AL138900.2-201 | ENST00000434098 | 156 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | LINC02238-202 | ENST00000436262 | 320 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RPS12P18-201 | ENST00000442381 | 270 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC009296.1-201 | ENST00000443146 | 155 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC009237.8-201 | ENST00000445492 | 379 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC016700.2-201 | ENST00000446011 | 156 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | NHS-AS1-201 | ENST00000452788 | 366 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AL354824.2-201 | ENST00000458004 | 446 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC092798.1-201 | ENST00000458542 | 409 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RPL23AP75-201 | ENST00000491601 | 451 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SEPT14P8-201 | ENST00000508026 | 178 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RN7SKP282-201 | ENST00000516824 | 299 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SNORA31.18-201 | ENST00000517043 | 134 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNA5SP380-201 | ENST00000517190 | 98 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC009107.1-201 | ENST00000561923 | 330 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC008739.1-201 | ENST00000598137 | 575 nt | TSL 2 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AL078605.1-201 | ENST00000603529 | 500 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC005696.2-201 | ENST00000610120 | 626 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | U4.7-201 | ENST00000638126 | 106 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC135776.4-201 | ENST00000624300 | 1904 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | FBXO11-201 | ENST00000402508 | 3844 nt | APPRIS P1 TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | PHTF2-201 | ENST00000248550 | 4778 nt | TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | KIAA0825-203 | ENST00000513200 | 4942 nt | TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | ZNF676-201 | ENST00000397121 | 2944 nt | APPRIS P1 TSL 2 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC009541.1-201 | ENST00000438279 | 2662 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | ZNF280C-201 | ENST00000370978 | 4634 nt | APPRIS P1 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | MIR422A-201 | ENST00000362286 | 90 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | Y_RNA.8-201 | ENST00000362353 | 102 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-879P-201 | ENST00000364328 | 108 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SNORD113-1-201 | ENST00000365321 | 69 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | DYNLT3P1-201 | ENST00000378574 | 347 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | TRAJ40-201 | ENST00000390497 | 61 nt | APPRIS P1 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | BTF3L4P2-201 | ENST00000392798 | 346 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AL109914.1-201 | ENST00000414740 | 146 nt | TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AL445259.1-203 | ENST00000427828 | 251 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | EIF1P2-201 | ENST00000428233 | 350 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC006539.3-201 | ENST00000454258 | 129 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | KC877373.1-201 | ENST00000479066 | 408 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | LINC02046-202 | ENST00000481334 | 390 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RPL30P1-201 | ENST00000488676 | 339 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNA5SP217-201 | ENST00000515959 | 91 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SNORD59.2-201 | ENST00000516873 | 68 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNA5SP165-201 | ENST00000517142 | 115 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-711P-201 | ENST00000517255 | 106 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC024270.4-201 | ENST00000570202 | 421 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AF001550.1-201 | ENST00000572747 | 573 nt | TSL 4 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC022809.1-201 | ENST00000579247 | 428 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | LINC01533-205 | ENST00000593056 | 607 nt | TSL 3 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | Z83818.1-201 | ENST00000603584 | 150 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | MZT1P2-201 | ENST00000604387 | 248 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC005000.2-201 | ENST00000605468 | 310 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC004832.4-201 | ENST00000608952 | 331 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | ADARB1-213 | ENST00000611195 | 159 nt | TSL 5 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AL162274.2-201 | ENST00000614406 | 332 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SMAD5-AS1_1.1-201 | ENST00000619886 | 266 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | CYSLTR1-201 | ENST00000373304 | 2576 nt | APPRIS P1 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | MYOT-208 | ENST00000515645 | 1578 nt | TSL 2 BASIC | 2.7 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | HERC5-203 | ENST00000508159 | 2243 nt | TSL 2 BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | AC073325.2-201 | ENST00000339545 | 159 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-78P-201 | ENST00000362897 | 107 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-1020P-201 | ENST00000363684 | 107 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU4-9P-201 | ENST00000364951 | 139 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-741P-201 | ENST00000383889 | 107 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SNORD63-201 | ENST00000384262 | 68 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-804P-201 | ENST00000384286 | 107 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | Y_RNA.504-201 | ENST00000384481 | 104 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | MIR32-201 | ENST00000384965 | 70 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | MIR483-201 | ENST00000385070 | 76 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| FOXG1 | P55316 | SNORA53-201 | ENST00000391141 | 249 nt | BASIC | 2.69 | □□□□□ -1.98 | | |