Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU7-175P-201ENST00000515915 61 ntBASIC2.55□□□□□ -2
CDH12P55289 AC021231.3-201ENST00000558497 370 ntBASIC2.55□□□□□ -2
CDH12P55289 MIR3944-201ENST00000581277 108 ntBASIC2.55□□□□□ -2
CDH12P55289 MIR4765-201ENST00000585007 77 ntBASIC2.55□□□□□ -2
CDH12P55289 AC006504.6-201ENST00000590142 199 ntBASIC2.55□□□□□ -2
CDH12P55289 RPL23AP78-201ENST00000599928 470 ntBASIC2.55□□□□□ -2
CDH12P55289 MIR92B-201ENST00000607575 96 ntBASIC2.55□□□□□ -2
CDH12P55289 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.55□□□□□ -2
CDH12P55289 MIR4272-201ENST00000635924 64 ntBASIC2.55□□□□□ -2
CDH12P55289 SNORD98-201ENST00000636377 67 ntBASIC2.55□□□□□ -2
CDH12P55289 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.55□□□□□ -2
CDH12P55289 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDH12P55289 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CDH12P55289 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CDH12P55289 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.54□□□□□ -2
CDH12P55289 Z75746.1-201ENST00000440243 2080 ntBASIC2.54□□□□□ -2
CDH12P55289 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDH12P55289 Y_RNA.422-201ENST00000384054 114 ntBASIC2.54□□□□□ -2
CDH12P55289 RNU6-639P-201ENST00000384074 107 ntBASIC2.54□□□□□ -2
CDH12P55289 U8.10-201ENST00000384260 133 ntBASIC2.54□□□□□ -2
CDH12P55289 MIR32-201ENST00000384965 70 ntBASIC2.54□□□□□ -2
CDH12P55289 MIR625-201ENST00000385047 85 ntBASIC2.54□□□□□ -2
CDH12P55289 Y_RNA.645-201ENST00000391229 102 ntBASIC2.54□□□□□ -2
CDH12P55289 MTCYBP2-201ENST00000407745 171 ntBASIC2.54□□□□□ -2
CDH12P55289 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDH12P55289 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.54□□□□□ -2
CDH12P55289 RNU7-169P-201ENST00000459456 61 ntBASIC2.54□□□□□ -2
CDH12P55289 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.54□□□□□ -2
CDH12P55289 AL121594.1-201ENST00000475906 575 ntBASIC2.54□□□□□ -2
CDH12P55289 RPS29P26-201ENST00000477483 171 ntBASIC2.54□□□□□ -2
CDH12P55289 HMGB1P35-201ENST00000503360 598 ntBASIC2.54□□□□□ -2
CDH12P55289 RNU7-4P-201ENST00000516961 62 ntBASIC2.54□□□□□ -2
CDH12P55289 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.54□□□□□ -2
CDH12P55289 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.54□□□□□ -2
CDH12P55289 HSPE1P20-201ENST00000538133 289 ntBASIC2.54□□□□□ -2
CDH12P55289 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.54□□□□□ -2
CDH12P55289 MIR4680-201ENST00000580906 66 ntBASIC2.54□□□□□ -2
CDH12P55289 Z98751.3-201ENST00000604447 521 ntBASIC2.54□□□□□ -2
CDH12P55289 AC007179.3-201ENST00000604976 235 ntBASIC2.54□□□□□ -2
CDH12P55289 AC100812.1-201ENST00000607622 580 ntBASIC2.54□□□□□ -2
CDH12P55289 AL162274.2-201ENST00000614406 332 ntBASIC2.54□□□□□ -2
CDH12P55289 AL606534.2-204ENST00000635008 178 ntBASIC2.54□□□□□ -2
CDH12P55289 MIR7515-201ENST00000637837 67 ntBASIC2.54□□□□□ -2
CDH12P55289 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.53□□□□□ -2
CDH12P55289 AC099654.7-201ENST00000635788 2127 ntBASIC2.53□□□□□ -2
CDH12P55289 AC091812.1-201ENST00000432235 1948 ntBASIC2.53□□□□□ -2
CDH12P55289 Y_RNA.39-201ENST00000362620 98 ntBASIC2.53□□□□□ -2
CDH12P55289 Y_RNA.158-201ENST00000363651 101 ntBASIC2.53□□□□□ -2
CDH12P55289 SNORD115-32-201ENST00000364079 82 ntBASIC2.53□□□□□ -2
CDH12P55289 RNU6-17P-201ENST00000384245 107 ntBASIC2.53□□□□□ -2
CDH12P55289 RNU6-18P-201ENST00000384527 107 ntBASIC2.53□□□□□ -2
CDH12P55289 snosnR66.1-201ENST00000391095 99 ntBASIC2.53□□□□□ -2
CDH12P55289 RPL21P75-201ENST00000396599 483 ntBASIC2.53□□□□□ -2
CDH12P55289 RPL21P28-201ENST00000401418 483 ntBASIC2.53□□□□□ -2
CDH12P55289 MIR1289-1-201ENST00000408836 144 ntBASIC2.53□□□□□ -2
CDH12P55289 EEF1A1P41-201ENST00000414667 207 ntBASIC2.53□□□□□ -2
CDH12P55289 AC113618.1-201ENST00000416747 285 ntBASIC2.53□□□□□ -2
CDH12P55289 AC012306.1-201ENST00000423267 114 ntBASIC2.53□□□□□ -2
CDH12P55289 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.53□□□□□ -2
CDH12P55289 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.53□□□□□ -2
CDH12P55289 RPL21P39-201ENST00000463605 483 ntBASIC2.53□□□□□ -2
CDH12P55289 RPL23AP70-201ENST00000483361 460 ntBASIC2.53□□□□□ -2
CDH12P55289 AC087190.1-201ENST00000484462 480 ntBASIC2.53□□□□□ -2
CDH12P55289 AC093591.1-201ENST00000491435 481 ntBASIC2.53□□□□□ -2
CDH12P55289 RPL21P16-201ENST00000495531 483 ntBASIC2.53□□□□□ -2
CDH12P55289 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.53□□□□□ -2
CDH12P55289 RNU6-327P-201ENST00000516270 127 ntBASIC2.53□□□□□ -2
CDH12P55289 SNORA74D-201ENST00000516404 141 ntBASIC2.53□□□□□ -2
CDH12P55289 RNU6-826P-201ENST00000516827 104 ntBASIC2.53□□□□□ -2
CDH12P55289 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.53□□□□□ -2
CDH12P55289 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.53□□□□□ -2
CDH12P55289 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.53□□□□□ -2
CDH12P55289 7SK.7-201ENST00000603504 247 ntBASIC2.53□□□□□ -2
CDH12P55289 AC005034.5-201ENST00000604219 466 ntBASIC2.53□□□□□ -2
CDH12P55289 AC116312.1-201ENST00000606841 314 ntBASIC2.53□□□□□ -2
CDH12P55289 AC096577.2-201ENST00000611455 153 ntBASIC2.53□□□□□ -2
CDH12P55289 PART1_1.1-201ENST00000611761 217 ntBASIC2.53□□□□□ -2
CDH12P55289 RMST_6.1-201ENST00000611980 203 ntBASIC2.53□□□□□ -2
CDH12P55289 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDH12P55289 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.53□□□□□ -2
CDH12P55289 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
CDH12P55289 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CDH12P55289 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.53□□□□□ -2.01
CDH12P55289 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH12P55289 RNU6-655P-201ENST00000362858 107 ntBASIC2.52□□□□□ -2.01
CDH12P55289 Y_RNA.106-201ENST00000363189 100 ntBASIC2.52□□□□□ -2.01
CDH12P55289 SNORA68.1-201ENST00000364537 132 ntBASIC2.52□□□□□ -2.01
CDH12P55289 SNORD21-201ENST00000383953 95 ntBASIC2.52□□□□□ -2.01
CDH12P55289 Y_RNA.592-201ENST00000410274 109 ntBASIC2.52□□□□□ -2.01
CDH12P55289 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH12P55289 EIF4EP4-201ENST00000424916 578 ntBASIC2.52□□□□□ -2.01
CDH12P55289 AL139132.1-201ENST00000431587 344 ntBASIC2.52□□□□□ -2.01
CDH12P55289 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH12P55289 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
CDH12P55289 U8.22-201ENST00000459141 133 ntBASIC2.52□□□□□ -2.01
CDH12P55289 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH12P55289 SEM1P1-201ENST00000506694 209 ntBASIC2.52□□□□□ -2.01
CDH12P55289 RNU2-53P-201ENST00000516257 147 ntBASIC2.52□□□□□ -2.01
CDH12P55289 Y_RNA.706-201ENST00000516933 99 ntBASIC2.52□□□□□ -2.01
CDH12P55289 RN7SKP57-201ENST00000517248 293 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms