Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL139109.1-201ENST00000455491 297 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 FO393415.2-201ENST00000480085 343 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 RPL7P42-201ENST00000481005 679 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.61□□□□□ -1.99
NR1H2P55055 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 RNU1-104P-201ENST00000517280 175 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.61□□□□□ -1.99
NR1H2P55055 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.61□□□□□ -1.99
NR1H2P55055 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.61□□□□□ -1.99
NR1H2P55055 MIR3923-201ENST00000579521 83 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 MIR4273-201ENST00000582824 84 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 MIR5690-201ENST00000583739 73 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 ELOCP29-201ENST00000588193 334 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 AL669831.3-213ENST00000636676 183 ntBASIC2.61□□□□□ -1.99
NR1H2P55055 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NR1H2P55055 AC096644.4-201ENST00000563417 2912 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 snoU2_19.1-201ENST00000362361 80 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 RNU6-1188P-201ENST00000363795 107 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 Y_RNA.404-201ENST00000383978 102 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 RNU6-546P-201ENST00000383991 107 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 RNU6-1274P-201ENST00000384557 107 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 MIR524-201ENST00000385242 87 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
NR1H2P55055 AC112220.1-201ENST00000434628 355 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 GPM6BP3-201ENST00000442797 145 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H2P55055 AL353752.1-201ENST00000454946 260 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.6□□□□□ -1.99
NR1H2P55055 AC117440.1-201ENST00000474107 571 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H2P55055 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.6□□□□□ -1.99
NR1H2P55055 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.6□□□□□ -1.99
NR1H2P55055 RNA5SP402-201ENST00000517148 110 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.6□□□□□ -1.99
NR1H2P55055 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.6□□□□□ -1.99
NR1H2P55055 CYCSP26-201ENST00000534107 320 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H2P55055 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.6□□□□□ -1.99
NR1H2P55055 AC098657.3-201ENST00000620434 263 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.6□□□□□ -1.99
NR1H2P55055 AL136360.1-201ENST00000503377 1900 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
NR1H2P55055 Y_RNA.259-201ENST00000364619 101 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 SNORA9.2-201ENST00000365361 133 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 SNORA25B-201ENST00000365507 128 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 RNU6-1032P-201ENST00000384100 107 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 Y_RNA.504-201ENST00000384481 104 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 SNORD116-29-201ENST00000384516 83 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 RNU6-174P-201ENST00000410406 106 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.59□□□□□ -1.99
NR1H2P55055 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.59□□□□□ -1.99
NR1H2P55055 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.59□□□□□ -1.99
NR1H2P55055 AC003982.1-202ENST00000469928 248 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 AC132942.1-201ENST00000486753 483 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 SCGB1D5P-201ENST00000515134 247 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 RNA5SP367-201ENST00000516557 118 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 Y_RNA.718-201ENST00000517110 102 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.59□□□□□ -1.99
NR1H2P55055 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.59□□□□□ -1.99
NR1H2P55055 AC084781.2-201ENST00000615568 161 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 IGHVIII-44-202ENST00000636235 289 ntBASIC2.59□□□□□ -1.99
NR1H2P55055 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
NR1H2P55055 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NR1H2P55055 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NR1H2P55055 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.59□□□□□ -2
NR1H2P55055 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
NR1H2P55055 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.58□□□□□ -2
NR1H2P55055 MIR26A1-201ENST00000362205 77 ntBASIC2.58□□□□□ -2
NR1H2P55055 Y_RNA.48-201ENST00000362710 103 ntBASIC2.58□□□□□ -2
NR1H2P55055 SNORD50.1-201ENST00000362987 71 ntBASIC2.58□□□□□ -2
NR1H2P55055 RNU6-596P-201ENST00000365395 98 ntBASIC2.58□□□□□ -2
NR1H2P55055 RNU6-784P-201ENST00000384330 106 ntBASIC2.58□□□□□ -2
NR1H2P55055 RNU6-331P-201ENST00000384724 107 ntBASIC2.58□□□□□ -2
NR1H2P55055 AL591034.2-201ENST00000402839 359 ntBASIC2.58□□□□□ -2
NR1H2P55055 RN7SKP284-201ENST00000411002 343 ntBASIC2.58□□□□□ -2
NR1H2P55055 MTCO2P27-201ENST00000420740 428 ntBASIC2.58□□□□□ -2
NR1H2P55055 AL139132.1-201ENST00000431587 344 ntBASIC2.58□□□□□ -2
NR1H2P55055 AC236972.2-201ENST00000434979 310 ntBASIC2.58□□□□□ -2
NR1H2P55055 RPL30P15-201ENST00000457129 321 ntBASIC2.58□□□□□ -2
NR1H2P55055 SNORD19B-201ENST00000459623 84 ntBASIC2.58□□□□□ -2
NR1H2P55055 SRIP1-201ENST00000489235 288 ntBASIC2.58□□□□□ -2
NR1H2P55055 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
NR1H2P55055 RN7SKP132-201ENST00000516001 208 ntBASIC2.58□□□□□ -2
NR1H2P55055 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.58□□□□□ -2
NR1H2P55055 AC022616.8-201ENST00000533569 253 ntBASIC2.58□□□□□ -2
NR1H2P55055 MRPS36P4-201ENST00000534436 298 ntBASIC2.58□□□□□ -2
NR1H2P55055 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.58□□□□□ -2
NR1H2P55055 MIR4319-201ENST00000577285 85 ntBASIC2.58□□□□□ -2
NR1H2P55055 MIR3126-201ENST00000577443 74 ntBASIC2.58□□□□□ -2
NR1H2P55055 AC013412.1-201ENST00000610687 192 ntBASIC2.58□□□□□ -2
NR1H2P55055 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NR1H2P55055 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
NR1H2P55055 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
NR1H2P55055 MTND5P9-201ENST00000503854 1755 ntBASIC2.57□□□□□ -2
NR1H2P55055 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
NR1H2P55055 AC092593.1-201ENST00000515413 1815 ntBASIC2.57□□□□□ -2
NR1H2P55055 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
NR1H2P55055 RNU6-310P-201ENST00000384655 107 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms