Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RPS29P27-201ENST00000463711 170 ntBASIC2.31□□□□□ -2.04
LBX1P52954 RNU6-323P-201ENST00000521915 107 ntBASIC2.31□□□□□ -2.04
LBX1P52954 AC025423.5-201ENST00000550230 219 ntBASIC2.31□□□□□ -2.04
LBX1P52954 TRAV32-201ENST00000553993 340 ntBASIC2.31□□□□□ -2.04
LBX1P52954 CPDP1-201ENST00000579660 283 ntBASIC2.31□□□□□ -2.04
LBX1P52954 AL512598.1-201ENST00000610158 273 ntBASIC2.31□□□□□ -2.04
LBX1P52954 PVT1_3.1-201ENST00000620853 95 ntBASIC2.31□□□□□ -2.04
LBX1P52954 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.31□□□□□ -2.04
LBX1P52954 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
LBX1P52954 AL359854.1-201ENST00000614203 1594 ntBASIC2.31□□□□□ -2.04
LBX1P52954 MTND5P35-201ENST00000557537 1720 ntBASIC2.31□□□□□ -2.04
LBX1P52954 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.3□□□□□ -2.04
LBX1P52954 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.3□□□□□ -2.04
LBX1P52954 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.3□□□□□ -2.04
LBX1P52954 SNORD32A-201ENST00000364805 84 ntBASIC2.3□□□□□ -2.04
LBX1P52954 Y_RNA.373-201ENST00000365600 103 ntBASIC2.3□□□□□ -2.04
LBX1P52954 RNY3P14-201ENST00000384309 102 ntBASIC2.3□□□□□ -2.04
LBX1P52954 MIR147B-201ENST00000390185 80 ntBASIC2.3□□□□□ -2.04
LBX1P52954 MIR450B-201ENST00000401182 78 ntBASIC2.3□□□□□ -2.04
LBX1P52954 RNA5SP390-201ENST00000410191 113 ntBASIC2.3□□□□□ -2.04
LBX1P52954 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.3□□□□□ -2.04
LBX1P52954 AL365400.1-201ENST00000431854 640 ntBASIC2.3□□□□□ -2.04
LBX1P52954 RPS4XP11-201ENST00000446897 772 ntBASIC2.3□□□□□ -2.04
LBX1P52954 AC008628.2-201ENST00000502605 298 ntBASIC2.3□□□□□ -2.04
LBX1P52954 AIG1P1-201ENST00000503376 148 ntBASIC2.3□□□□□ -2.04
LBX1P52954 RNU4-49P-201ENST00000516080 140 ntBASIC2.3□□□□□ -2.04
LBX1P52954 RNU6-1088P-201ENST00000516850 104 ntBASIC2.3□□□□□ -2.04
LBX1P52954 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.3□□□□□ -2.04
LBX1P52954 MIR4446-201ENST00000578505 67 ntBASIC2.3□□□□□ -2.04
LBX1P52954 AC103810.1-201ENST00000579873 453 ntBASIC2.3□□□□□ -2.04
LBX1P52954 AC022709.1-201ENST00000615967 87 ntBASIC2.3□□□□□ -2.04
LBX1P52954 KPNA2P1-201ENST00000458289 1591 ntBASIC2.3□□□□□ -2.04
LBX1P52954 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LBX1P52954 RNU6-95P-201ENST00000384697 107 ntBASIC2.29□□□□□ -2.04
LBX1P52954 RNU2-23P-201ENST00000410545 195 ntBASIC2.29□□□□□ -2.04
LBX1P52954 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.29□□□□□ -2.04
LBX1P52954 IFNA20P-201ENST00000436840 528 ntBASIC2.29□□□□□ -2.04
LBX1P52954 ATP5J2P3-201ENST00000451550 258 ntBASIC2.29□□□□□ -2.04
LBX1P52954 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.29□□□□□ -2.04
LBX1P52954 MTND1P11-201ENST00000456661 876 ntBASIC2.29□□□□□ -2.04
LBX1P52954 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.29□□□□□ -2.04
LBX1P52954 AC008526.1-201ENST00000509149 338 ntBASIC2.29□□□□□ -2.04
LBX1P52954 SNORA31.15-201ENST00000516771 132 ntBASIC2.29□□□□□ -2.04
LBX1P52954 RNA5SP102-201ENST00000516865 106 ntBASIC2.29□□□□□ -2.04
LBX1P52954 RN7SKP256-201ENST00000517201 314 ntBASIC2.29□□□□□ -2.04
LBX1P52954 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.29□□□□□ -2.04
LBX1P52954 AC109329.1-201ENST00000518744 317 ntBASIC2.29□□□□□ -2.04
LBX1P52954 AP000763.2-201ENST00000540641 163 ntBASIC2.29□□□□□ -2.04
LBX1P52954 AC103996.1-201ENST00000555468 102 ntBASIC2.29□□□□□ -2.04
LBX1P52954 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.29□□□□□ -2.04
LBX1P52954 AL356575.1-201ENST00000603008 283 ntBASIC2.29□□□□□ -2.04
LBX1P52954 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.29□□□□□ -2.04
LBX1P52954 MIR7157-201ENST00000635801 60 ntBASIC2.29□□□□□ -2.04
LBX1P52954 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LBX1P52954 MTND5P30-201ENST00000452896 1731 ntBASIC2.28□□□□□ -2.04
LBX1P52954 MTND4P23-201ENST00000447723 1363 ntBASIC2.28□□□□□ -2.04
LBX1P52954 RNU6-1285P-201ENST00000363480 105 ntBASIC2.28□□□□□ -2.04
LBX1P52954 Y_RNA.160-201ENST00000363677 92 ntBASIC2.28□□□□□ -2.04
LBX1P52954 SNORD114-22-201ENST00000365423 72 ntBASIC2.28□□□□□ -2.04
LBX1P52954 SNORA48.3-201ENST00000391081 134 ntBASIC2.28□□□□□ -2.04
LBX1P52954 SNORA26.3-201ENST00000391119 136 ntBASIC2.28□□□□□ -2.04
LBX1P52954 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LBX1P52954 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LBX1P52954 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LBX1P52954 MTND3P8-201ENST00000412909 339 ntBASIC2.28□□□□□ -2.04
LBX1P52954 AIMP1P2-201ENST00000425294 312 ntBASIC2.28□□□□□ -2.04
LBX1P52954 RPL30P4-201ENST00000429309 333 ntBASIC2.28□□□□□ -2.04
LBX1P52954 AL645568.3-201ENST00000433683 316 ntBASIC2.28□□□□□ -2.04
LBX1P52954 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LBX1P52954 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.28□□□□□ -2.04
LBX1P52954 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.28□□□□□ -2.04
LBX1P52954 AMD1P1-201ENST00000457220 922 ntBASIC2.28□□□□□ -2.04
LBX1P52954 HMGN1P7-201ENST00000491722 313 ntBASIC2.28□□□□□ -2.04
LBX1P52954 AC046134.1-201ENST00000514454 666 ntBASIC2.28□□□□□ -2.04
LBX1P52954 RNU6-377P-201ENST00000515965 102 ntBASIC2.28□□□□□ -2.04
LBX1P52954 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.28□□□□□ -2.04
LBX1P52954 Y_RNA.691-201ENST00000516611 103 ntBASIC2.28□□□□□ -2.04
LBX1P52954 RNU6-1332P-201ENST00000516666 104 ntBASIC2.28□□□□□ -2.04
LBX1P52954 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.28□□□□□ -2.04
LBX1P52954 AP005639.2-201ENST00000527592 928 ntBASIC2.28□□□□□ -2.04
LBX1P52954 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.28□□□□□ -2.04
LBX1P52954 uc_338.5-201ENST00000611839 155 ntBASIC2.28□□□□□ -2.04
LBX1P52954 AC084768.2-201ENST00000622736 221 ntBASIC2.28□□□□□ -2.04
LBX1P52954 AL133216.2-202ENST00000634512 349 ntBASIC2.28□□□□□ -2.04
LBX1P52954 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.27□□□□□ -2.05
LBX1P52954 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LBX1P52954 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.27□□□□□ -2.05
LBX1P52954 RNU6-845P-201ENST00000362578 103 ntBASIC2.27□□□□□ -2.05
LBX1P52954 SNORD56.1-201ENST00000362913 68 ntBASIC2.27□□□□□ -2.05
LBX1P52954 RNU6-1252P-201ENST00000363054 104 ntBASIC2.27□□□□□ -2.05
LBX1P52954 Y_RNA.339-201ENST00000365325 102 ntBASIC2.27□□□□□ -2.05
LBX1P52954 SNORD116-11-201ENST00000383882 92 ntBASIC2.27□□□□□ -2.05
LBX1P52954 RNU6-692P-201ENST00000384496 107 ntBASIC2.27□□□□□ -2.05
LBX1P52954 RNU6-342P-201ENST00000384521 104 ntBASIC2.27□□□□□ -2.05
LBX1P52954 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.27□□□□□ -2.05
LBX1P52954 AL590632.1-201ENST00000424289 371 ntBASIC2.27□□□□□ -2.05
LBX1P52954 MTATP6P23-201ENST00000440153 476 ntBASIC2.27□□□□□ -2.05
LBX1P52954 AL031274.1-201ENST00000450334 232 ntBASIC2.27□□□□□ -2.05
LBX1P52954 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.27□□□□□ -2.05
LBX1P52954 PMCHL2-203ENST00000457791 237 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms