Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC084824.5-201ENST00000612009 413 ntBASIC0.46□□□□□ -2.34
NUP98P52948 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.46□□□□□ -2.34
NUP98P52948 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.46□□□□□ -2.34
NUP98P52948 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.46□□□□□ -2.34
NUP98P52948 SNORA72.2-201ENST00000365028 127 ntBASIC0.45□□□□□ -2.34
NUP98P52948 SNORA40.2-201ENST00000390847 128 ntBASIC0.45□□□□□ -2.34
NUP98P52948 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.45□□□□□ -2.34
NUP98P52948 RPL31P35-201ENST00000431058 377 ntBASIC0.45□□□□□ -2.34
NUP98P52948 SNRPEP8-201ENST00000442866 260 ntBASIC0.45□□□□□ -2.34
NUP98P52948 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.45□□□□□ -2.34
NUP98P52948 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.45□□□□□ -2.34
NUP98P52948 AC022447.4-201ENST00000504053 364 ntBASIC0.45□□□□□ -2.34
NUP98P52948 RNU5F-4P-201ENST00000516581 114 ntBASIC0.45□□□□□ -2.34
NUP98P52948 APOOP3-201ENST00000536787 586 ntBASIC0.45□□□□□ -2.34
NUP98P52948 AC087883.1-201ENST00000551882 391 ntBASIC0.45□□□□□ -2.34
NUP98P52948 AC008507.2-201ENST00000588402 1176 ntBASIC0.45□□□□□ -2.34
NUP98P52948 AC107304.1-201ENST00000604229 296 ntBASIC0.45□□□□□ -2.34
NUP98P52948 AC091948.2-201ENST00000636510 279 ntBASIC0.45□□□□□ -2.34
NUP98P52948 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
NUP98P52948 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
NUP98P52948 RNU6-723P-201ENST00000383973 107 ntBASIC0.45□□□□□ -2.34
NUP98P52948 RNA5SP63-201ENST00000391225 112 ntBASIC0.45□□□□□ -2.34
NUP98P52948 RAP1BP3-201ENST00000407180 549 ntBASIC0.45□□□□□ -2.34
NUP98P52948 RAB28P5-201ENST00000427490 651 ntBASIC0.45□□□□□ -2.34
NUP98P52948 AC243964.1-201ENST00000441814 261 ntBASIC0.45□□□□□ -2.34
NUP98P52948 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.45□□□□□ -2.34
NUP98P52948 ART2BP-201ENST00000453501 499 ntBASIC0.45□□□□□ -2.34
NUP98P52948 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.45□□□□□ -2.34
NUP98P52948 AC048334.1-201ENST00000477975 159 ntBASIC0.45□□□□□ -2.34
NUP98P52948 RNA5SP168-201ENST00000516642 112 ntBASIC0.45□□□□□ -2.34
NUP98P52948 AC015688.6-201ENST00000577737 104 ntBASIC0.45□□□□□ -2.34
NUP98P52948 AC008088.1-201ENST00000580993 280 ntBASIC0.45□□□□□ -2.34
NUP98P52948 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.45□□□□□ -2.34
NUP98P52948 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.45□□□□□ -2.34
NUP98P52948 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.45□□□□□ -2.34
NUP98P52948 AC103706.2-201ENST00000638080 240 ntBASIC0.45□□□□□ -2.34
NUP98P52948 RNU6-224P-201ENST00000384055 107 ntBASIC0.44□□□□□ -2.34
NUP98P52948 RNU6-1179P-201ENST00000384667 107 ntBASIC0.44□□□□□ -2.34
NUP98P52948 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP98P52948 AC000111.3-201ENST00000433478 193 ntBASIC0.44□□□□□ -2.34
NUP98P52948 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
NUP98P52948 AC105758.1-201ENST00000506038 399 ntBASIC0.44□□□□□ -2.34
NUP98P52948 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP98P52948 AC068587.4-201ENST00000533893 186 ntBASIC0.44□□□□□ -2.34
NUP98P52948 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.44□□□□□ -2.34
NUP98P52948 MIR544B-201ENST00000582372 78 ntBASIC0.44□□□□□ -2.34
NUP98P52948 AC091135.1-201ENST00000585943 307 ntBASIC0.44□□□□□ -2.34
NUP98P52948 AC067863.3-201ENST00000624172 122 ntBASIC0.44□□□□□ -2.34
NUP98P52948 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.44□□□□□ -2.34
NUP98P52948 SNORD116-12-201ENST00000384468 92 ntBASIC0.43□□□□□ -2.34
NUP98P52948 SNORA12.2-201ENST00000391040 156 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AC063976.4-201ENST00000421971 163 ntBASIC0.43□□□□□ -2.34
NUP98P52948 RNU6-1146P-201ENST00000516282 102 ntBASIC0.43□□□□□ -2.34
NUP98P52948 SNORD60.2-201ENST00000516883 86 ntBASIC0.43□□□□□ -2.34
NUP98P52948 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.43□□□□□ -2.34
NUP98P52948 MIR4709-201ENST00000577272 72 ntBASIC0.43□□□□□ -2.34
NUP98P52948 MIR5692A1-201ENST00000580523 69 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AC072039.2-201ENST00000608883 439 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AC092106.3-201ENST00000611308 722 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AL512427.1-201ENST00000618593 349 ntBASIC0.43□□□□□ -2.34
NUP98P52948 MIR5087-201ENST00000635826 76 ntBASIC0.43□□□□□ -2.34
NUP98P52948 MIR6086-201ENST00000638065 55 ntBASIC0.43□□□□□ -2.34
NUP98P52948 MTND4P12-201ENST00000498999 1377 ntBASIC0.43□□□□□ -2.34
NUP98P52948 Y_RNA.274-201ENST00000364714 101 ntBASIC0.43□□□□□ -2.34
NUP98P52948 Y_RNA.280-201ENST00000364765 112 ntBASIC0.43□□□□□ -2.34
NUP98P52948 Y_RNA.412-201ENST00000384001 104 ntBASIC0.43□□□□□ -2.34
NUP98P52948 MIR548B-201ENST00000385247 97 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.43□□□□□ -2.34
NUP98P52948 AC073614.1-201ENST00000438690 650 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AC245047.7-201ENST00000440265 293 ntBASIC0.43□□□□□ -2.34
NUP98P52948 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AP001893.2-201ENST00000526949 202 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AL121579.1-201ENST00000555129 305 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AC105129.3-201ENST00000605455 485 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AC012557.2-201ENST00000605919 418 ntBASIC0.43□□□□□ -2.34
NUP98P52948 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.43□□□□□ -2.34
NUP98P52948 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
NUP98P52948 MIR340-201ENST00000362125 95 ntBASIC0.42□□□□□ -2.34
NUP98P52948 U3.8-201ENST00000363675 217 ntBASIC0.42□□□□□ -2.34
NUP98P52948 RNU6-371P-201ENST00000364283 108 ntBASIC0.42□□□□□ -2.34
NUP98P52948 MIR10B-201ENST00000385011 110 ntBASIC0.42□□□□□ -2.34
NUP98P52948 MIR1284-201ENST00000408337 120 ntBASIC0.42□□□□□ -2.34
NUP98P52948 RNA5SP201-201ENST00000410316 124 ntBASIC0.42□□□□□ -2.34
NUP98P52948 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.42□□□□□ -2.34
NUP98P52948 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.42□□□□□ -2.34
NUP98P52948 RNA5SP255-201ENST00000516370 107 ntBASIC0.42□□□□□ -2.34
NUP98P52948 MTND2P7-201ENST00000521337 640 ntBASIC0.42□□□□□ -2.34
NUP98P52948 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.42□□□□□ -2.34
NUP98P52948 MIR3923-201ENST00000579521 83 ntBASIC0.42□□□□□ -2.34
NUP98P52948 HMGN1P30-201ENST00000589286 268 ntBASIC0.42□□□□□ -2.34
NUP98P52948 AC010620.1-201ENST00000601088 1102 ntBASIC0.42□□□□□ -2.34
NUP98P52948 AC026585.1-201ENST00000619582 524 ntBASIC0.42□□□□□ -2.34
NUP98P52948 SNORD98-201ENST00000636377 67 ntBASIC0.42□□□□□ -2.34
NUP98P52948 AL391994.1-201ENST00000254724 282 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RNY4P24-201ENST00000362735 96 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RNA5SP259-201ENST00000365541 109 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RNU6-43P-201ENST00000384302 107 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RNU6-110P-201ENST00000384508 104 ntBASIC0.41□□□□□ -2.34
NUP98P52948 RNA5SP111-201ENST00000411386 101 ntBASIC0.41□□□□□ -2.34
NUP98P52948 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms