Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.92□□□□□ -2.1
SMSP52788 AC007547.1-201ENST00000462177 490 ntBASIC1.92□□□□□ -2.1
SMSP52788 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.92□□□□□ -2.1
SMSP52788 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.92□□□□□ -2.1
SMSP52788 AL512360.1-201ENST00000555346 234 ntBASIC1.92□□□□□ -2.1
SMSP52788 CYP4A27P-201ENST00000567218 190 ntBASIC1.92□□□□□ -2.1
SMSP52788 AC011494.1-201ENST00000596454 237 ntBASIC1.92□□□□□ -2.1
SMSP52788 AC243960.4-201ENST00000600532 288 ntBASIC1.92□□□□□ -2.1
SMSP52788 AC078795.3-201ENST00000602913 472 ntBASIC1.92□□□□□ -2.1
SMSP52788 RPL17P51-201ENST00000605218 238 ntBASIC1.92□□□□□ -2.1
SMSP52788 AC016727.1-205ENST00000605437 569 ntBASIC1.92□□□□□ -2.1
SMSP52788 AC092807.2-201ENST00000609367 243 ntBASIC1.92□□□□□ -2.1
SMSP52788 RMST_6.1-201ENST00000611980 203 ntBASIC1.92□□□□□ -2.1
SMSP52788 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.92□□□□□ -2.1
SMSP52788 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SMSP52788 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMSP52788 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.91□□□□□ -2.1
SMSP52788 MTND4P23-201ENST00000447723 1363 ntBASIC1.91□□□□□ -2.1
SMSP52788 U3.9-201ENST00000363823 204 ntBASIC1.91□□□□□ -2.1
SMSP52788 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
SMSP52788 Y_RNA.332-201ENST00000365271 113 ntBASIC1.91□□□□□ -2.1
SMSP52788 Y_RNA.338-201ENST00000365320 114 ntBASIC1.91□□□□□ -2.1
SMSP52788 RNU6-1329P-201ENST00000365664 107 ntBASIC1.91□□□□□ -2.1
SMSP52788 SNORA8-201ENST00000384574 139 ntBASIC1.91□□□□□ -2.1
SMSP52788 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
SMSP52788 SNORD73A-201ENST00000386062 65 ntBASIC1.91□□□□□ -2.1
SMSP52788 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SMSP52788 AL356432.1-201ENST00000405809 419 ntBASIC1.91□□□□□ -2.1
SMSP52788 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.91□□□□□ -2.1
SMSP52788 EIF4EP2-201ENST00000422816 654 ntBASIC1.91□□□□□ -2.1
SMSP52788 BX510359.4-201ENST00000423750 193 ntBASIC1.91□□□□□ -2.1
SMSP52788 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.91□□□□□ -2.1
SMSP52788 AL359672.1-201ENST00000442302 409 ntBASIC1.91□□□□□ -2.1
SMSP52788 RPL23AP6-201ENST00000446637 472 ntBASIC1.91□□□□□ -2.1
SMSP52788 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.91□□□□□ -2.1
SMSP52788 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.91□□□□□ -2.1
SMSP52788 AC091874.1-201ENST00000511402 339 ntBASIC1.91□□□□□ -2.1
SMSP52788 RNU6-1038P-201ENST00000516516 104 ntBASIC1.91□□□□□ -2.1
SMSP52788 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
SMSP52788 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.91□□□□□ -2.1
SMSP52788 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.91□□□□□ -2.1
SMSP52788 SCOCP1-201ENST00000554676 349 ntBASIC1.91□□□□□ -2.1
SMSP52788 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.91□□□□□ -2.1
SMSP52788 HMGB1P33-201ENST00000563485 527 ntBASIC1.91□□□□□ -2.1
SMSP52788 AC100830.2-201ENST00000581636 240 ntBASIC1.91□□□□□ -2.1
SMSP52788 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.91□□□□□ -2.1
SMSP52788 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.91□□□□□ -2.1
SMSP52788 Z98751.3-201ENST00000604447 521 ntBASIC1.91□□□□□ -2.1
SMSP52788 AC064807.4-201ENST00000607201 407 ntBASIC1.91□□□□□ -2.1
SMSP52788 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.91□□□□□ -2.1
SMSP52788 AC009318.2-201ENST00000610917 651 ntBASIC1.91□□□□□ -2.1
SMSP52788 AL773524.1-201ENST00000614065 229 ntBASIC1.91□□□□□ -2.1
SMSP52788 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.91□□□□□ -2.1
SMSP52788 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
SMSP52788 RNU6-227P-201ENST00000362865 103 ntBASIC1.9□□□□□ -2.11
SMSP52788 Y_RNA.231-201ENST00000364358 102 ntBASIC1.9□□□□□ -2.11
SMSP52788 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SMSP52788 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SMSP52788 SNORA12-201ENST00000391162 147 ntBASIC1.9□□□□□ -2.11
SMSP52788 RNA5SP212-201ENST00000391223 107 ntBASIC1.9□□□□□ -2.11
SMSP52788 EIF1AXP1-201ENST00000419267 435 ntBASIC1.9□□□□□ -2.11
SMSP52788 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.9□□□□□ -2.11
SMSP52788 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
SMSP52788 MTCO1P20-201ENST00000425366 358 ntBASIC1.9□□□□□ -2.11
SMSP52788 SEPT14P3-201ENST00000439401 183 ntBASIC1.9□□□□□ -2.11
SMSP52788 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.9□□□□□ -2.11
SMSP52788 AL732372.2-207ENST00000445840 183 ntBASIC1.9□□□□□ -2.11
SMSP52788 SEPT14P2-201ENST00000453405 183 ntBASIC1.9□□□□□ -2.11
SMSP52788 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.9□□□□□ -2.11
SMSP52788 RPS29P27-201ENST00000463711 170 ntBASIC1.9□□□□□ -2.11
SMSP52788 AC104564.1-201ENST00000493028 407 ntBASIC1.9□□□□□ -2.11
SMSP52788 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.9□□□□□ -2.11
SMSP52788 SEPT14P4-201ENST00000513445 186 ntBASIC1.9□□□□□ -2.11
SMSP52788 SNORA19.2-201ENST00000516013 114 ntBASIC1.9□□□□□ -2.11
SMSP52788 RNU6-612P-201ENST00000516909 102 ntBASIC1.9□□□□□ -2.11
SMSP52788 RNU6-323P-201ENST00000521915 107 ntBASIC1.9□□□□□ -2.11
SMSP52788 FO082796.1-201ENST00000523795 183 ntBASIC1.9□□□□□ -2.11
SMSP52788 EIF4A1P12-201ENST00000551910 141 ntBASIC1.9□□□□□ -2.11
SMSP52788 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.9□□□□□ -2.11
SMSP52788 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
SMSP52788 AL162413.1-201ENST00000603198 110 ntBASIC1.9□□□□□ -2.11
SMSP52788 AC004492.1-201ENST00000607036 742 ntBASIC1.9□□□□□ -2.11
SMSP52788 AC068944.2-201ENST00000610373 403 ntBASIC1.9□□□□□ -2.11
SMSP52788 U1.36-201ENST00000620684 176 ntBASIC1.9□□□□□ -2.11
SMSP52788 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.9□□□□□ -2.11
SMSP52788 RNA5SP276-201ENST00000362580 94 ntBASIC1.89□□□□□ -2.11
SMSP52788 SNORD115-3-201ENST00000363100 82 ntBASIC1.89□□□□□ -2.11
SMSP52788 Y_RNA.140-201ENST00000363474 103 ntBASIC1.89□□□□□ -2.11
SMSP52788 RNU6-743P-201ENST00000364151 106 ntBASIC1.89□□□□□ -2.11
SMSP52788 RNU6-522P-201ENST00000364497 107 ntBASIC1.89□□□□□ -2.11
SMSP52788 Y_RNA.504-201ENST00000384481 104 ntBASIC1.89□□□□□ -2.11
SMSP52788 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMSP52788 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.89□□□□□ -2.11
SMSP52788 UBE2V1P4-201ENST00000425374 344 ntBASIC1.89□□□□□ -2.11
SMSP52788 AC007677.1-201ENST00000445757 515 ntBASIC1.89□□□□□ -2.11
SMSP52788 HMGN2P18-201ENST00000450680 270 ntBASIC1.89□□□□□ -2.11
SMSP52788 AC005741.1-201ENST00000511094 432 ntBASIC1.89□□□□□ -2.11
SMSP52788 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.89□□□□□ -2.11
SMSP52788 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.89□□□□□ -2.11
SMSP52788 AL157687.1-201ENST00000554853 619 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms