Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU2-27P-201ENST00000516185 142 ntBASIC4.03□□□□□ -1.76
USP11P51784 SNORA70.18-201ENST00000516696 98 ntBASIC4.03□□□□□ -1.76
USP11P51784 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.03□□□□□ -1.76
USP11P51784 IGKV2D-19-201ENST00000523346 262 ntBASIC4.03□□□□□ -1.76
USP11P51784 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP11P51784 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.03□□□□□ -1.76
USP11P51784 HSPE1P4-201ENST00000550617 308 ntBASIC4.03□□□□□ -1.76
USP11P51784 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.03□□□□□ -1.76
USP11P51784 AL138963.2-201ENST00000605137 226 ntBASIC4.03□□□□□ -1.76
USP11P51784 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.03□□□□□ -1.76
USP11P51784 AC069200.1-201ENST00000609511 323 ntBASIC4.03□□□□□ -1.76
USP11P51784 FTX_3.1-201ENST00000610451 147 ntBASIC4.03□□□□□ -1.76
USP11P51784 MIR8058-201ENST00000615737 89 ntBASIC4.03□□□□□ -1.76
USP11P51784 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.03□□□□□ -1.76
USP11P51784 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.03□□□□□ -1.76
USP11P51784 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP11P51784 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP11P51784 AF127577.6-201ENST00000623352 2191 ntBASIC4.03□□□□□ -1.76
USP11P51784 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
USP11P51784 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP11P51784 AC008568.2-201ENST00000623862 2313 ntBASIC4.03□□□□□ -1.77
USP11P51784 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
USP11P51784 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.02□□□□□ -1.77
USP11P51784 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP11P51784 RNU6-50P-201ENST00000362356 103 ntBASIC4.02□□□□□ -1.77
USP11P51784 SNORA63.1-201ENST00000362493 131 ntBASIC4.02□□□□□ -1.77
USP11P51784 Y_RNA.23-201ENST00000362496 106 ntBASIC4.02□□□□□ -1.77
USP11P51784 SNORA31-201ENST00000362607 130 ntBASIC4.02□□□□□ -1.77
USP11P51784 RNU6-1272P-201ENST00000362776 107 ntBASIC4.02□□□□□ -1.77
USP11P51784 Y_RNA.261-201ENST00000364631 102 ntBASIC4.02□□□□□ -1.77
USP11P51784 MIR544A-201ENST00000384855 91 ntBASIC4.02□□□□□ -1.77
USP11P51784 Y_RNA.595-201ENST00000410403 105 ntBASIC4.02□□□□□ -1.77
USP11P51784 RN7SKP53-201ENST00000411337 315 ntBASIC4.02□□□□□ -1.77
USP11P51784 DBIP2-201ENST00000419076 262 ntBASIC4.02□□□□□ -1.77
USP11P51784 AC002075.2-201ENST00000425207 252 ntBASIC4.02□□□□□ -1.77
USP11P51784 AL590383.1-201ENST00000428602 75 ntBASIC4.02□□□□□ -1.77
USP11P51784 GPM6BP3-201ENST00000442797 145 ntBASIC4.02□□□□□ -1.77
USP11P51784 MTATP6P7-201ENST00000453315 681 ntBASIC4.02□□□□□ -1.77
USP11P51784 U3.44-201ENST00000458938 192 ntBASIC4.02□□□□□ -1.77
USP11P51784 SNRPGP3-201ENST00000469405 227 ntBASIC4.02□□□□□ -1.77
USP11P51784 AC084357.1-201ENST00000473404 255 ntBASIC4.02□□□□□ -1.77
USP11P51784 RN7SKP289-201ENST00000517244 295 ntBASIC4.02□□□□□ -1.77
USP11P51784 AC010999.1-201ENST00000611856 324 ntBASIC4.02□□□□□ -1.77
USP11P51784 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.02□□□□□ -1.77
USP11P51784 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP11P51784 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USP11P51784 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
USP11P51784 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
USP11P51784 AL049781.1-201ENST00000623195 3585 ntBASIC4.01□□□□□ -1.77
USP11P51784 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.01□□□□□ -1.77
USP11P51784 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP11P51784 RNA5SP119-201ENST00000362715 117 ntBASIC4.01□□□□□ -1.77
USP11P51784 Y_RNA.75-201ENST00000362927 97 ntBASIC4.01□□□□□ -1.77
USP11P51784 RNU6-215P-201ENST00000365169 102 ntBASIC4.01□□□□□ -1.77
USP11P51784 RNU1-100P-201ENST00000365255 165 ntBASIC4.01□□□□□ -1.77
USP11P51784 Y_RNA.333-201ENST00000365274 102 ntBASIC4.01□□□□□ -1.77
USP11P51784 MIR218-2-201ENST00000385006 110 ntBASIC4.01□□□□□ -1.77
USP11P51784 RPS29P4-201ENST00000414733 161 ntBASIC4.01□□□□□ -1.77
USP11P51784 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.01□□□□□ -1.77
USP11P51784 Y_RNA.637-201ENST00000459424 114 ntBASIC4.01□□□□□ -1.77
USP11P51784 RPS27AP9-201ENST00000477681 438 ntBASIC4.01□□□□□ -1.77
USP11P51784 AC010409.1-201ENST00000487382 476 ntBASIC4.01□□□□□ -1.77
USP11P51784 RNU6-1198P-201ENST00000516904 67 ntBASIC4.01□□□□□ -1.77
USP11P51784 CR383656.8-201ENST00000549046 145 ntBASIC4.01□□□□□ -1.77
USP11P51784 AC018448.1-201ENST00000552843 316 ntBASIC4.01□□□□□ -1.77
USP11P51784 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.01□□□□□ -1.77
USP11P51784 MIR3922-201ENST00000585192 84 ntBASIC4.01□□□□□ -1.77
USP11P51784 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
USP11P51784 DEFB117-201ENST00000602356 141 ntBASIC4.01□□□□□ -1.77
USP11P51784 AC004467.1-201ENST00000615678 330 ntBASIC4.01□□□□□ -1.77
USP11P51784 Y_RNA.778-201ENST00000620203 90 ntBASIC4.01□□□□□ -1.77
USP11P51784 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USP11P51784 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.01□□□□□ -1.77
USP11P51784 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.01□□□□□ -1.77
USP11P51784 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP11P51784 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP11P51784 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP11P51784 AC092593.1-201ENST00000515413 1815 ntBASIC4□□□□□ -1.77
USP11P51784 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
USP11P51784 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4□□□□□ -1.77
USP11P51784 RNU6-151P-201ENST00000364158 107 ntBASIC4□□□□□ -1.77
USP11P51784 RNA5SP205-201ENST00000364653 136 ntBASIC4□□□□□ -1.77
USP11P51784 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4□□□□□ -1.77
USP11P51784 FTH1P15-201ENST00000406984 280 ntBASIC4□□□□□ -1.77
USP11P51784 RN7SKP111-201ENST00000410349 271 ntBASIC4□□□□□ -1.77
USP11P51784 ELOCP21-201ENST00000412558 336 ntBASIC4□□□□□ -1.77
USP11P51784 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4□□□□□ -1.77
USP11P51784 BTF3P11-201ENST00000426582 477 ntBASIC4□□□□□ -1.77
USP11P51784 HMGN2P31-201ENST00000432430 273 ntBASIC4□□□□□ -1.77
USP11P51784 RNU6-625P-201ENST00000459412 107 ntBASIC4□□□□□ -1.77
USP11P51784 SNORA31.23-201ENST00000517219 133 ntBASIC4□□□□□ -1.77
USP11P51784 AP002001.1-203ENST00000534002 267 ntBASIC4□□□□□ -1.77
USP11P51784 AC019159.1-201ENST00000605094 187 ntBASIC4□□□□□ -1.77
USP11P51784 MIR6134-201ENST00000617606 109 ntBASIC4□□□□□ -1.77
USP11P51784 AC091932.3-201ENST00000624223 323 ntBASIC4□□□□□ -1.77
USP11P51784 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP11P51784 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4□□□□□ -1.77
USP11P51784 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP11P51784 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4□□□□□ -1.77
USP11P51784 AC068647.1-201ENST00000489539 2265 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms