Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK3P49761 MIR4276-201ENST00000584832 70 ntBASIC3.09□□□□□ -1.91
CLK3P49761 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.09□□□□□ -1.91
CLK3P49761 AC011476.5-201ENST00000615594 130 ntBASIC3.09□□□□□ -1.91
CLK3P49761 AC084757.4-201ENST00000616350 526 ntBASIC3.09□□□□□ -1.91
CLK3P49761 SCARNA4-201ENST00000629045 128 ntBASIC3.09□□□□□ -1.91
CLK3P49761 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CLK3P49761 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.09□□□□□ -1.92
CLK3P49761 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.09□□□□□ -1.92
CLK3P49761 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLK3P49761 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CLK3P49761 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.08□□□□□ -1.92
CLK3P49761 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
CLK3P49761 RNU6-78P-201ENST00000362897 107 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RNA5SP72-201ENST00000364442 117 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RNY4P28-201ENST00000365281 93 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RNA5SP240-201ENST00000365355 128 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RNU6-326P-201ENST00000365480 107 ntBASIC3.08□□□□□ -1.92
CLK3P49761 U8.9-201ENST00000365667 134 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RNU6-17P-201ENST00000384245 107 ntBASIC3.08□□□□□ -1.92
CLK3P49761 Y_RNA.504-201ENST00000384481 104 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RNU6-18P-201ENST00000384527 107 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RPL21P3-201ENST00000395517 478 ntBASIC3.08□□□□□ -1.92
CLK3P49761 Y_RNA.626-201ENST00000411288 95 ntBASIC3.08□□□□□ -1.92
CLK3P49761 COX6CP10-201ENST00000416832 224 ntBASIC3.08□□□□□ -1.92
CLK3P49761 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK3P49761 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.08□□□□□ -1.92
CLK3P49761 Z82188.1-201ENST00000436709 154 ntBASIC3.08□□□□□ -1.92
CLK3P49761 CYCSP32-201ENST00000440548 321 ntBASIC3.08□□□□□ -1.92
CLK3P49761 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CLK3P49761 AC124916.1-201ENST00000444020 547 ntBASIC3.08□□□□□ -1.92
CLK3P49761 AC016700.2-201ENST00000446011 156 ntBASIC3.08□□□□□ -1.92
CLK3P49761 PRSS3P4-201ENST00000453323 162 ntBASIC3.08□□□□□ -1.92
CLK3P49761 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK3P49761 RNU7-23P-201ENST00000459465 62 ntBASIC3.08□□□□□ -1.92
CLK3P49761 AC146507.2-201ENST00000460608 476 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RPS29P20-201ENST00000489592 171 ntBASIC3.08□□□□□ -1.92
CLK3P49761 RPS27AP10-201ENST00000496103 208 ntBASIC3.08□□□□□ -1.92
CLK3P49761 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.08□□□□□ -1.92
CLK3P49761 HMGN2P15-201ENST00000585707 270 ntBASIC3.08□□□□□ -1.92
CLK3P49761 AC010928.2-201ENST00000588017 287 ntBASIC3.08□□□□□ -1.92
CLK3P49761 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.08□□□□□ -1.92
CLK3P49761 SCARNA4-202ENST00000625402 129 ntBASIC3.08□□□□□ -1.92
CLK3P49761 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.08□□□□□ -1.92
CLK3P49761 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CLK3P49761 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLK3P49761 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.08□□□□□ -1.92
CLK3P49761 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLK3P49761 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.07□□□□□ -1.92
CLK3P49761 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLK3P49761 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLK3P49761 AC010680.1-201ENST00000590024 3590 ntBASIC3.07□□□□□ -1.92
CLK3P49761 SNORD115-32-201ENST00000364079 82 ntBASIC3.07□□□□□ -1.92
CLK3P49761 RNU6-493P-201ENST00000391321 108 ntBASIC3.07□□□□□ -1.92
CLK3P49761 RNA5SP44-201ENST00000410446 133 ntBASIC3.07□□□□□ -1.92
CLK3P49761 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
CLK3P49761 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.07□□□□□ -1.92
CLK3P49761 AC009296.1-201ENST00000443146 155 ntBASIC3.07□□□□□ -1.92
CLK3P49761 MRPL42P6-201ENST00000486397 371 ntBASIC3.07□□□□□ -1.92
CLK3P49761 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
CLK3P49761 RN7SKP282-201ENST00000516824 299 ntBASIC3.07□□□□□ -1.92
CLK3P49761 RNU6-1183P-201ENST00000517054 60 ntBASIC3.07□□□□□ -1.92
CLK3P49761 AL162424.1-201ENST00000602325 221 ntBASIC3.07□□□□□ -1.92
CLK3P49761 AC072026.1-201ENST00000605023 201 ntBASIC3.07□□□□□ -1.92
CLK3P49761 SNORD113-5-201ENST00000607261 78 ntBASIC3.07□□□□□ -1.92
CLK3P49761 RMST_6.1-201ENST00000611980 203 ntBASIC3.07□□□□□ -1.92
CLK3P49761 uc_338.1-201ENST00000612113 180 ntBASIC3.07□□□□□ -1.92
CLK3P49761 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.07□□□□□ -1.92
CLK3P49761 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLK3P49761 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
CLK3P49761 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
CLK3P49761 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLK3P49761 RNU6-222P-201ENST00000362438 107 ntBASIC3.06□□□□□ -1.92
CLK3P49761 Y_RNA.122-201ENST00000363331 96 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RNA5SP197-201ENST00000363357 119 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RNU6-105P-201ENST00000363909 104 ntBASIC3.06□□□□□ -1.92
CLK3P49761 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RNU6-968P-201ENST00000384076 107 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RNU6-72P-201ENST00000384285 79 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RNA5SP344-201ENST00000411081 104 ntBASIC3.06□□□□□ -1.92
CLK3P49761 EIF1P2-201ENST00000428233 350 ntBASIC3.06□□□□□ -1.92
CLK3P49761 YME1L1P1-201ENST00000429435 297 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.06□□□□□ -1.92
CLK3P49761 AC005002.2-201ENST00000438228 269 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AC009541.1-201ENST00000438279 2662 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AC115115.1-201ENST00000449927 248 ntBASIC3.06□□□□□ -1.92
CLK3P49761 snoU109.2-201ENST00000459316 135 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RPL23AP75-201ENST00000491601 451 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RNU6-861P-201ENST00000516745 106 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RNU2-31P-201ENST00000516954 155 ntBASIC3.06□□□□□ -1.92
CLK3P49761 RN7SKP272-201ENST00000516988 232 ntBASIC3.06□□□□□ -1.92
CLK3P49761 SNORA31.21-201ENST00000517180 77 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.06□□□□□ -1.92
CLK3P49761 AC007536.1-201ENST00000533382 349 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.06□□□□□ -1.92
CLK3P49761 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK3P49761 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.06□□□□□ -1.92
CLK3P49761 MZT1P2-201ENST00000604387 248 ntBASIC3.06□□□□□ -1.92
CLK3P49761 AL162713.1-201ENST00000604480 262 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 151 ms