Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 Z96811.1-201ENST00000445880 108 ntBASIC2.64□□□□□ -1.99
SOX2P48431 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.64□□□□□ -1.99
SOX2P48431 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.64□□□□□ -1.99
SOX2P48431 AP000705.1-201ENST00000454567 350 ntBASIC2.64□□□□□ -1.99
SOX2P48431 U8.22-201ENST00000459141 133 ntBASIC2.64□□□□□ -1.99
SOX2P48431 RN7SL863P-201ENST00000462370 296 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AC008155.2-201ENST00000464337 397 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AC091153.1-201ENST00000466297 402 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AL121594.1-201ENST00000475906 575 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.64□□□□□ -1.99
SOX2P48431 AC110794.1-201ENST00000505816 425 ntBASIC2.64□□□□□ -1.99
SOX2P48431 MRPS35P2-201ENST00000508242 191 ntBASIC2.64□□□□□ -1.99
SOX2P48431 SNORA25.11-201ENST00000515935 105 ntBASIC2.64□□□□□ -1.99
SOX2P48431 RNU2-53P-201ENST00000516257 147 ntBASIC2.64□□□□□ -1.99
SOX2P48431 RNU6-58P-201ENST00000517143 103 ntBASIC2.64□□□□□ -1.99
SOX2P48431 SCARNA11.3-201ENST00000517276 130 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AC131281.1-201ENST00000522984 164 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AC027288.2-201ENST00000553028 243 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.64□□□□□ -1.99
SOX2P48431 AP000942.4-201ENST00000604811 241 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AC007318.2-201ENST00000620999 243 ntBASIC2.64□□□□□ -1.99
SOX2P48431 AC099654.7-201ENST00000635788 2127 ntBASIC2.64□□□□□ -1.99
SOX2P48431 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.64□□□□□ -1.99
SOX2P48431 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SOX2P48431 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.64□□□□□ -1.99
SOX2P48431 RNU6-486P-201ENST00000363116 107 ntBASIC2.63□□□□□ -1.99
SOX2P48431 SNORD115-8-201ENST00000363856 82 ntBASIC2.63□□□□□ -1.99
SOX2P48431 Y_RNA.210-201ENST00000364161 110 ntBASIC2.63□□□□□ -1.99
SOX2P48431 RNU1-33P-201ENST00000364249 162 ntBASIC2.63□□□□□ -1.99
SOX2P48431 SNORD115-38-201ENST00000365037 82 ntBASIC2.63□□□□□ -1.99
SOX2P48431 RNU6-708P-201ENST00000384217 107 ntBASIC2.63□□□□□ -1.99
SOX2P48431 RNY3P4-201ENST00000384428 101 ntBASIC2.63□□□□□ -1.99
SOX2P48431 U3.19-201ENST00000390893 196 ntBASIC2.63□□□□□ -1.99
SOX2P48431 MIR208B-201ENST00000401172 77 ntBASIC2.63□□□□□ -1.99
SOX2P48431 RN7SKP220-201ENST00000410611 288 ntBASIC2.63□□□□□ -1.99
SOX2P48431 RPL21P2-201ENST00000440049 481 ntBASIC2.63□□□□□ -1.99
SOX2P48431 CYCSP35-201ENST00000451978 304 ntBASIC2.63□□□□□ -1.99
SOX2P48431 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.63□□□□□ -1.99
SOX2P48431 AC010655.3-201ENST00000478818 450 ntBASIC2.63□□□□□ -1.99
SOX2P48431 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.63□□□□□ -1.99
SOX2P48431 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.63□□□□□ -1.99
SOX2P48431 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.63□□□□□ -1.99
SOX2P48431 MTCO2P24-201ENST00000515611 426 ntBASIC2.63□□□□□ -1.99
SOX2P48431 RNU6-635P-201ENST00000516651 102 ntBASIC2.63□□□□□ -1.99
SOX2P48431 RNA5SP54-201ENST00000516951 92 ntBASIC2.63□□□□□ -1.99
SOX2P48431 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.63□□□□□ -1.99
SOX2P48431 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.63□□□□□ -1.99
SOX2P48431 AC007536.1-201ENST00000533382 349 ntBASIC2.63□□□□□ -1.99
SOX2P48431 AP002770.2-201ENST00000543613 532 ntBASIC2.63□□□□□ -1.99
SOX2P48431 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.63□□□□□ -1.99
SOX2P48431 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.63□□□□□ -1.99
SOX2P48431 AC034105.4-201ENST00000568304 277 ntBASIC2.63□□□□□ -1.99
SOX2P48431 AC103810.1-201ENST00000579873 453 ntBASIC2.63□□□□□ -1.99
SOX2P48431 UBL5P2-201ENST00000583788 219 ntBASIC2.63□□□□□ -1.99
SOX2P48431 AC078899.3-201ENST00000599065 212 ntBASIC2.63□□□□□ -1.99
SOX2P48431 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SOX2P48431 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SOX2P48431 RNU6-879P-201ENST00000364328 108 ntBASIC2.62□□□□□ -1.99
SOX2P48431 SNORA62.3-201ENST00000365110 153 ntBASIC2.62□□□□□ -1.99
SOX2P48431 U8.9-201ENST00000365667 134 ntBASIC2.62□□□□□ -1.99
SOX2P48431 Y_RNA.471-201ENST00000384312 102 ntBASIC2.62□□□□□ -1.99
SOX2P48431 RNU6-196P-201ENST00000384315 107 ntBASIC2.62□□□□□ -1.99
SOX2P48431 RNU6-463P-201ENST00000384340 107 ntBASIC2.62□□□□□ -1.99
SOX2P48431 MIR487A-201ENST00000385009 80 ntBASIC2.62□□□□□ -1.99
SOX2P48431 RNU6-159P-201ENST00000391080 106 ntBASIC2.62□□□□□ -1.99
SOX2P48431 RNU6-1093P-201ENST00000391194 107 ntBASIC2.62□□□□□ -1.99
SOX2P48431 CBX3P9-201ENST00000402326 552 ntBASIC2.62□□□□□ -1.99
SOX2P48431 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SOX2P48431 EIF4EP4-201ENST00000424916 578 ntBASIC2.62□□□□□ -1.99
SOX2P48431 EIF1P2-201ENST00000428233 350 ntBASIC2.62□□□□□ -1.99
SOX2P48431 MTCYBP9-201ENST00000431021 303 ntBASIC2.62□□□□□ -1.99
SOX2P48431 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.62□□□□□ -1.99
SOX2P48431 AC073910.1-201ENST00000445047 438 ntBASIC2.62□□□□□ -1.99
SOX2P48431 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.62□□□□□ -1.99
SOX2P48431 RPS3P1-201ENST00000456781 192 ntBASIC2.62□□□□□ -1.99
SOX2P48431 SEM1P1-201ENST00000506694 209 ntBASIC2.62□□□□□ -1.99
SOX2P48431 AC034114.1-201ENST00000520293 285 ntBASIC2.62□□□□□ -1.99
SOX2P48431 AP002404.1-201ENST00000532005 451 ntBASIC2.62□□□□□ -1.99
SOX2P48431 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
SOX2P48431 MIR92B-201ENST00000607575 96 ntBASIC2.62□□□□□ -1.99
SOX2P48431 AC005520.5-201ENST00000613926 164 ntBASIC2.62□□□□□ -1.99
SOX2P48431 AC005296.1-201ENST00000616145 209 ntBASIC2.62□□□□□ -1.99
SOX2P48431 7SK.10-201ENST00000621414 298 ntBASIC2.62□□□□□ -1.99
SOX2P48431 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SOX2P48431 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
SOX2P48431 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.61□□□□□ -1.99
SOX2P48431 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SOX2P48431 AC073325.2-201ENST00000339545 159 ntBASIC2.61□□□□□ -1.99
SOX2P48431 Y_RNA.47-201ENST00000362697 108 ntBASIC2.61□□□□□ -1.99
SOX2P48431 RNU6-1301P-201ENST00000362724 104 ntBASIC2.61□□□□□ -1.99
SOX2P48431 MIR181B1-201ENST00000385240 110 ntBASIC2.61□□□□□ -1.99
SOX2P48431 PTMAP2-201ENST00000397627 327 ntBASIC2.61□□□□□ -1.99
SOX2P48431 MIR1302-3-201ENST00000408128 138 ntBASIC2.61□□□□□ -1.99
SOX2P48431 RN7SKP123-201ENST00000410732 291 ntBASIC2.61□□□□□ -1.99
SOX2P48431 AL451074.5-201ENST00000415894 435 ntBASIC2.61□□□□□ -1.99
SOX2P48431 WARS2P1-201ENST00000429678 537 ntBASIC2.61□□□□□ -1.99
SOX2P48431 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.61□□□□□ -1.99
SOX2P48431 RPS15AP7-201ENST00000439294 405 ntBASIC2.61□□□□□ -1.99
SOX2P48431 AC096638.1-201ENST00000444678 216 ntBASIC2.61□□□□□ -1.99
SOX2P48431 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms