Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SUMO1P4-201ENST00000429430 302 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 RPS12P2-201ENST00000439728 269 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.17□□□□□ -2.06
NKX2-1P43699 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.17□□□□□ -2.06
NKX2-1P43699 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.17□□□□□ -2.06
NKX2-1P43699 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.17□□□□□ -2.06
NKX2-1P43699 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.17□□□□□ -2.06
NKX2-1P43699 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.17□□□□□ -2.06
NKX2-1P43699 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.17□□□□□ -2.06
NKX2-1P43699 HSPE1P4-201ENST00000550617 308 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 AC109446.1-201ENST00000566172 220 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.17□□□□□ -2.06
NKX2-1P43699 MIR5092-201ENST00000583139 88 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 MTND4LP32-201ENST00000636111 270 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 MTND4P29-201ENST00000503122 1372 ntBASIC2.17□□□□□ -2.06
NKX2-1P43699 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NKX2-1P43699 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
NKX2-1P43699 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX2-1P43699 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.16□□□□□ -2.06
NKX2-1P43699 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.16□□□□□ -2.06
NKX2-1P43699 RNU6-1059P-201ENST00000363752 98 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 SNORD115-8-201ENST00000363856 82 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 Y_RNA.197-201ENST00000364004 102 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 RNU4-9P-201ENST00000364951 139 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 SNORD115-38-201ENST00000365037 82 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 RNU6-1040P-201ENST00000383974 107 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 SNORA29-201ENST00000384183 140 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 SNORA48.5-201ENST00000391143 135 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AL590556.1-201ENST00000423231 483 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AC018865.2-201ENST00000423631 129 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 CBX3P6-201ENST00000430257 527 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AC112220.1-201ENST00000434628 355 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.16□□□□□ -2.06
NKX2-1P43699 MTCO3P10-201ENST00000455912 772 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.16□□□□□ -2.06
NKX2-1P43699 RPL7P42-201ENST00000481005 679 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 RPL17P19-201ENST00000489069 552 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 RPL23AP75-201ENST00000491601 451 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 RNU6-470P-201ENST00000515954 104 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 RNU6-1170P-201ENST00000515974 106 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 RNA5SP384-201ENST00000516615 116 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 SNORA31.15-201ENST00000516771 132 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.16□□□□□ -2.06
NKX2-1P43699 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.16□□□□□ -2.06
NKX2-1P43699 MIR4325-201ENST00000583049 90 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AL034555.1-201ENST00000604816 211 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AC005014.2-201ENST00000607795 599 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 RMST_6.1-201ENST00000611980 203 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AL162274.2-201ENST00000614406 332 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 AC084781.2-201ENST00000615568 161 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.16□□□□□ -2.06
NKX2-1P43699 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.16□□□□□ -2.06
NKX2-1P43699 SNORD98-201ENST00000636377 67 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.16□□□□□ -2.06
NKX2-1P43699 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NKX2-1P43699 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.16□□□□□ -2.06
NKX2-1P43699 AC069528.2-201ENST00000624849 1991 ntBASIC2.16□□□□□ -2.06
NKX2-1P43699 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
NKX2-1P43699 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
NKX2-1P43699 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.15□□□□□ -2.06
NKX2-1P43699 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.15□□□□□ -2.07
NKX2-1P43699 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
NKX2-1P43699 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NKX2-1P43699 MIR208A-201ENST00000362287 71 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 Y_RNA.2-201ENST00000362330 96 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 Y_RNA.123-201ENST00000363338 102 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 Y_RNA.252-201ENST00000364556 101 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 Y_RNA.577-201ENST00000384794 101 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 RNA5SP201-201ENST00000410316 124 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.15□□□□□ -2.07
NKX2-1P43699 MTCYBP6-201ENST00000441810 138 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AL353752.1-201ENST00000454946 260 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AC007215.1-201ENST00000464893 276 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.15□□□□□ -2.07
NKX2-1P43699 AC091874.1-201ENST00000511402 339 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 RNU6-976P-201ENST00000516086 111 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 Y_RNA.701-201ENST00000516812 110 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 RN7SKP57-201ENST00000517248 293 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.15□□□□□ -2.07
NKX2-1P43699 CBX3P8-201ENST00000532412 525 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AC007375.1-201ENST00000554513 578 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.15□□□□□ -2.07
NKX2-1P43699 AC074050.1-201ENST00000563247 211 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 MIR4446-201ENST00000578505 67 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AC044792.1-201ENST00000593294 196 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AL158827.2-201ENST00000602494 330 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AL161756.2-201ENST00000604597 246 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AC080078.3-201ENST00000605407 463 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AL080274.1-201ENST00000605565 220 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 AL691447.3-201ENST00000635020 330 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 ZNF271P-202ENST00000465539 1970 ntBASIC2.15□□□□□ -2.07
NKX2-1P43699 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
NKX2-1P43699 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.15□□□□□ -2.07
NKX2-1P43699 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.15□□□□□ -2.07
NKX2-1P43699 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NKX2-1P43699 RNU6-1115P-201ENST00000362490 106 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 U3.13-201ENST00000364804 214 ntBASIC2.14□□□□□ -2.07
NKX2-1P43699 RNU6-1227P-201ENST00000383981 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms