Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 AC107032.1-201ENST00000485945 480 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 RNU6-1332P-201ENST00000516666 104 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 RNA5SP82-201ENST00000516707 92 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 SNORA31.25-201ENST00000517242 134 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 AC107953.1-201ENST00000522216 297 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 AC110588.1-201ENST00000559699 137 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 MIR4529-201ENST00000578110 78 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 VN1R107P-201ENST00000601784 209 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 SNRPGP17-201ENST00000603780 214 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TNFRSF4P43489 MIR6895-201ENST00000613497 78 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 AC022202.1-201ENST00000613515 211 ntBASIC2.01□□□□□ -2.09
TNFRSF4P43489 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
TNFRSF4P43489 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TNFRSF4P43489 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
TNFRSF4P43489 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TNFRSF4P43489 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
TNFRSF4P43489 AC121333.1-201ENST00000567488 2709 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 Y_RNA.86-201ENST00000363020 111 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 Y_RNA.100-201ENST00000363141 102 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 SNORD113-7-201ENST00000363762 77 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
TNFRSF4P43489 Y_RNA.530-201ENST00000384587 101 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 RNU6-1106P-201ENST00000390845 107 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 RNU6-876P-201ENST00000391295 104 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 MIR450B-201ENST00000401182 78 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AL356776.1-201ENST00000406574 447 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2□□□□□ -2.09
TNFRSF4P43489 RPL30P16-201ENST00000419341 429 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2□□□□□ -2.09
TNFRSF4P43489 CYCSP49-201ENST00000420810 319 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 RPS15AP10-201ENST00000432472 382 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 NDUFA5P4-201ENST00000436704 385 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AL137159.1-201ENST00000452808 512 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2□□□□□ -2.09
TNFRSF4P43489 RPL31P58-201ENST00000469001 379 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2□□□□□ -2.09
TNFRSF4P43489 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2□□□□□ -2.09
TNFRSF4P43489 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2□□□□□ -2.09
TNFRSF4P43489 AC025465.4-201ENST00000513422 638 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC104576.1-201ENST00000524225 88 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AF235103.2-201ENST00000525753 346 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC022616.8-201ENST00000533569 253 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2□□□□□ -2.09
TNFRSF4P43489 AC233702.2-202ENST00000562547 291 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC060780.3-201ENST00000589464 80 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC007229.1-201ENST00000590455 412 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 RBM11P1-201ENST00000604951 799 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC006504.8-201ENST00000621046 635 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 AC009033.1-201ENST00000624279 431 ntBASIC2□□□□□ -2.09
TNFRSF4P43489 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
TNFRSF4P43489 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TNFRSF4P43489 CASC19-280ENST00000642102 1351 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU6-1285P-201ENST00000363480 105 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU6-944P-201ENST00000364023 107 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU6-692P-201ENST00000384496 107 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 MIR144-201ENST00000384886 86 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 SNORA40.19-201ENST00000390846 128 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 RPS29P13-201ENST00000402041 169 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 AL445685.2-201ENST00000422551 342 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 AC018710.1-201ENST00000506509 158 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU5F-2P-201ENST00000516066 82 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU6-358P-201ENST00000516564 75 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU6-273P-201ENST00000516937 96 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU6-1314P-201ENST00000517139 104 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU2-19P-201ENST00000517288 84 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.99□□□□□ -2.09
TNFRSF4P43489 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFRSF4P43489 AP005597.4-201ENST00000526762 229 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.99□□□□□ -2.09
TNFRSF4P43489 AC018630.3-201ENST00000542637 96 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 AC103996.1-201ENST00000555468 102 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 AL136221.1-201ENST00000621449 509 ntBASIC1.99□□□□□ -2.09
TNFRSF4P43489 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TNFRSF4P43489 RNU6-254P-201ENST00000363377 107 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 RNU6-1141P-201ENST00000364520 107 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 Y_RNA.414-201ENST00000384011 101 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 RNU6-214P-201ENST00000384130 107 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 RNU6-611P-201ENST00000384276 104 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 RNU6-43P-201ENST00000384302 107 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 HMGN2P39-201ENST00000398005 273 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 AL355497.1-201ENST00000406262 551 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 Y_RNA.597-201ENST00000410463 100 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 AL359672.1-201ENST00000442302 409 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.98□□□□□ -2.09
TNFRSF4P43489 AC055731.1-201ENST00000474387 401 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 AC022447.4-201ENST00000504053 364 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 FAM206BP-201ENST00000510179 541 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.98□□□□□ -2.09
TNFRSF4P43489 AC018638.8-201ENST00000588755 281 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 AL034555.1-201ENST00000604816 211 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TNFRSF4P43489 AL137847.3-201ENST00000611521 109 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 AC063943.3-201ENST00000615562 356 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.98□□□□□ -2.09
TNFRSF4P43489 AP000560.1-201ENST00000624150 1937 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms