Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.35□□□□□ -2.47
CLIP1P30622 RNU6-212P-201ENST00000362642 104 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 RNA5SP451-201ENST00000410588 110 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 RNU4-27P-201ENST00000410889 139 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.36□□□□□ -2.47
CLIP1P30622 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.36□□□□□ -2.47
CLIP1P30622 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.36□□□□□ -2.47
CLIP1P30622 SEPT7P5-201ENST00000434048 306 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 SEPT7P4-201ENST00000437076 306 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC069257.2-201ENST00000441819 155 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC020550.1-201ENST00000447385 163 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.36□□□□□ -2.47
CLIP1P30622 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.36□□□□□ -2.47
CLIP1P30622 snoU13.14-201ENST00000459372 104 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 RNU6-572P-201ENST00000516724 80 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC091163.3-201ENST00000518269 1144 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC106038.2-201ENST00000520706 568 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC027419.1-201ENST00000522976 328 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC023157.2-201ENST00000540596 141 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC025678.1-201ENST00000567861 338 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC131055.1-201ENST00000584626 316 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 RNU4-5P-201ENST00000607255 135 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 AC092634.7-201ENST00000621022 103 ntBASIC-0.36□□□□□ -2.47
CLIP1P30622 DBF4P1-201ENST00000412976 1892 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
CLIP1P30622 RNA5SP128-201ENST00000365305 116 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 RNU6-793P-201ENST00000384233 104 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 RNU6-891P-201ENST00000384280 111 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 RNU6-843P-201ENST00000384454 104 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AL603865.2-201ENST00000401679 213 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AL139421.1-201ENST00000423010 169 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AL162725.1-201ENST00000435405 301 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 LARP1BP3-201ENST00000437229 869 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.37□□□□□ -2.47
CLIP1P30622 MTCO3P10-201ENST00000455912 772 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AC013828.1-201ENST00000481845 158 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 SNORA25.12-201ENST00000516202 82 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 RNU6-889P-201ENST00000517189 103 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.37□□□□□ -2.47
CLIP1P30622 AC009902.1-201ENST00000519351 183 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 MIR4764-201ENST00000580680 88 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AC008759.3-201ENST00000613300 508 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AC136475.10-201ENST00000620253 385 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AC104985.3-201ENST00000623479 597 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 AC099654.9-201ENST00000637055 678 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 SGO1P1-201ENST00000603525 1447 ntBASIC-0.37□□□□□ -2.47
CLIP1P30622 RNU6-622P-201ENST00000384272 103 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 MIR16-1-201ENST00000385271 89 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AL034345.1-201ENST00000407768 123 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 RNU2-23P-201ENST00000410545 195 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 RNA5SP504-201ENST00000410676 117 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.38□□□□□ -2.47
CLIP1P30622 MTCO2P1-201ENST00000424648 477 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 MTND1P20-201ENST00000430341 950 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 ELOCP30-201ENST00000447108 299 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AC109810.1-201ENST00000534066 224 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.38□□□□□ -2.47
CLIP1P30622 AL929325.1-201ENST00000603096 117 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.38□□□□□ -2.47
CLIP1P30622 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 MIR644A-201ENST00000385262 94 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.38□□□□□ -2.47
CLIP1P30622 VPS26BP1-201ENST00000417155 755 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.38□□□□□ -2.47
CLIP1P30622 AC012308.1-201ENST00000451232 178 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-0.38□□□□□ -2.47
CLIP1P30622 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 MTCO2P18-201ENST00000457151 658 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 snoU13.11-201ENST00000459219 104 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.38□□□□□ -2.47
CLIP1P30622 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.38□□□□□ -2.47
CLIP1P30622 SUB1P2-201ENST00000556401 297 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.38□□□□□ -2.47
CLIP1P30622 AC064807.4-201ENST00000607201 407 ntBASIC-0.38□□□□□ -2.47
CLIP1P30622 SNORD105-201ENST00000386910 85 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 SNORA12.2-201ENST00000391040 156 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 AC068533.2-201ENST00000411872 306 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 BX119904.4-201ENST00000424402 301 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 AC003071.1-201ENST00000451219 789 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.39□□□□□ -2.47
CLIP1P30622 AC116347.2-201ENST00000514912 523 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.39□□□□□ -2.47
CLIP1P30622 AC011155.2-201ENST00000623202 216 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 AL078595.3-201ENST00000623815 1166 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 AL356094.1-201ENST00000624663 1212 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 MIR3529-201ENST00000637713 78 ntBASIC-0.39□□□□□ -2.47
CLIP1P30622 SNORA12-201ENST00000391162 147 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 RNU6-754P-201ENST00000391166 107 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 TPMTP2-201ENST00000414372 726 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 MTCO3P41-201ENST00000414801 328 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 MTCYBP10-201ENST00000424905 650 ntBASIC-0.4□□□□□ -2.47
CLIP1P30622 AL353777.1-201ENST00000425552 326 ntBASIC-0.4□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms