Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 ISCA1P6-201ENST00000427740 390 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 MED13P1-201ENST00000428342 171 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.73□□□□□ -2.29
CD40LGP29965 AL031313.1-201ENST00000448435 256 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.73□□□□□ -2.29
CD40LGP29965 RPL39P38-201ENST00000467018 153 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 RNU6-377P-201ENST00000515965 102 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.73□□□□□ -2.29
CD40LGP29965 AC136628.3-201ENST00000521868 290 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.73□□□□□ -2.29
CD40LGP29965 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.73□□□□□ -2.29
CD40LGP29965 MTCO2P2-201ENST00000591258 225 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 CTHRC1P1-201ENST00000605383 469 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 AC008945.2-201ENST00000606056 604 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 AL157392.4-201ENST00000609756 345 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 AC019226.2-201ENST00000625973 424 ntBASIC0.73□□□□□ -2.29
CD40LGP29965 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CD40LGP29965 Y_RNA.22-201ENST00000362492 102 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-37P-201ENST00000362692 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU1-76P-201ENST00000362903 159 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-11P-201ENST00000364234 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 SNORA72.2-201ENST00000365028 127 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 SNORA18.2-201ENST00000383865 132 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-25P-201ENST00000383873 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-1-201ENST00000383898 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-1080P-201ENST00000383982 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-533P-201ENST00000384144 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-48P-201ENST00000384161 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-36P-201ENST00000384172 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-4P-201ENST00000384205 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-5P-201ENST00000384238 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-3P-201ENST00000384314 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-16P-201ENST00000384385 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-15P-201ENST00000384534 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-2-201ENST00000384627 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-29P-201ENST00000384637 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-9-201ENST00000384776 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-33P-201ENST00000384793 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 MIR532-201ENST00000385025 91 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RPS24P1-201ENST00000438550 371 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.72□□□□□ -2.29
CD40LGP29965 MTCO2P29-201ENST00000465212 189 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.72□□□□□ -2.29
CD40LGP29965 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-685P-201ENST00000517088 95 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.72□□□□□ -2.29
CD40LGP29965 BNIP3P16-201ENST00000589779 534 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 AC105148.1-201ENST00000604961 409 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 AC105129.3-201ENST00000605455 485 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 RNU6-6P-201ENST00000606623 107 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 AC126177.8-201ENST00000618339 1015 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 AL133216.2-202ENST00000634512 349 ntBASIC0.72□□□□□ -2.29
CD40LGP29965 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 Y_RNA.132-201ENST00000363421 102 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 RNU6-1026P-201ENST00000384465 108 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 RNU6-83P-201ENST00000384568 112 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 SNORD12-201ENST00000391002 90 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 SNORA26.3-201ENST00000391119 136 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AC114482.1-201ENST00000418010 247 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 RAB28P5-201ENST00000427490 651 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.71□□□□□ -2.3
CD40LGP29965 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.71□□□□□ -2.3
CD40LGP29965 PDCD5P2-201ENST00000507570 312 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AC067942.3-201ENST00000512025 362 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AC011406.1-201ENST00000512440 370 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AC074344.1-201ENST00000512823 224 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 SNORA31.4-201ENST00000516049 129 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
CD40LGP29965 EIF4A1P12-201ENST00000551910 141 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AC090888.2-201ENST00000559765 1144 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AC078795.3-201ENST00000602913 472 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AL356157.2-201ENST00000605122 111 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AL031775.1-201ENST00000607014 887 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 RNU4-5P-201ENST00000607255 135 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
CD40LGP29965 AC104010.1-201ENST00000616889 150 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AL031667.3-201ENST00000620124 655 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 AC008163.1-202ENST00000636004 2889 ntBASIC0.71□□□□□ -2.3
CD40LGP29965 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CD40LGP29965 Y_RNA.18-201ENST00000362461 102 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 RNU4-79P-201ENST00000362764 141 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 U3.4-201ENST00000363352 213 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 RNU6-336P-201ENST00000364891 107 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 RNU6-378P-201ENST00000384324 107 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 ELOCP4-201ENST00000420090 333 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 AC060773.1-201ENST00000421698 310 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 MTND1P18-201ENST00000448191 573 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 AL163973.1-201ENST00000484753 577 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.7□□□□□ -2.3
CD40LGP29965 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.7□□□□□ -2.3
CD40LGP29965 RNA5SP384-201ENST00000516615 116 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.7□□□□□ -2.3
CD40LGP29965 MIR6866-201ENST00000638146 69 ntBASIC0.7□□□□□ -2.3
CD40LGP29965 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms