Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.44□□□□□ -2.02
ABCD3P28288 FTH1P25-201ENST00000447665 469 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 HMGN1P12-201ENST00000499125 195 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 AC103851.1-201ENST00000506833 274 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 RNU6-965P-201ENST00000516721 96 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 SNORA31.15-201ENST00000516771 132 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.44□□□□□ -2.02
ABCD3P28288 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.44□□□□□ -2.02
ABCD3P28288 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.44□□□□□ -2.02
ABCD3P28288 7SK.7-201ENST00000603504 247 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ABCD3P28288 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ABCD3P28288 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
ABCD3P28288 Y_RNA.184-201ENST00000363884 108 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 Y_RNA.482-201ENST00000384377 111 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 MIR592-201ENST00000384959 97 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 RNU6-1093P-201ENST00000391194 107 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AL357139.1-201ENST00000407792 426 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 RNA5SP270-201ENST00000411361 118 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 SRIP3-201ENST00000413200 219 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AL358453.1-201ENST00000422522 250 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 MRPL50P4-201ENST00000446432 475 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AC245102.2-201ENST00000448956 180 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 OR2AQ1P-201ENST00000451972 200 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AL137159.1-201ENST00000452808 512 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 snoU13.6-201ENST00000458785 104 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AC087477.1-201ENST00000465747 340 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 RPL23AP75-201ENST00000491601 451 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AF186996.7-201ENST00000492781 209 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AC096725.1-201ENST00000514266 313 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.43□□□□□ -2.02
ABCD3P28288 MIR5696-201ENST00000578474 85 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AL356575.1-201ENST00000603008 283 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AC018462.2-201ENST00000605375 395 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 AL355073.2-201ENST00000612106 557 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 TPTEP1-208ENST00000636884 213 ntBASIC2.43□□□□□ -2.02
ABCD3P28288 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ABCD3P28288 ZNF271P-202ENST00000465539 1970 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 Y_RNA.88-201ENST00000363029 99 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 SNORD115-32-201ENST00000364079 82 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 RNU6-234P-201ENST00000365229 104 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 Y_RNA.490-201ENST00000384413 102 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 RNU6-601P-201ENST00000384540 107 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 USP9YP30-201ENST00000430729 455 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 AC108938.1-201ENST00000451204 136 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 AL109933.2-201ENST00000452651 260 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCD3P28288 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCD3P28288 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCD3P28288 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCD3P28288 RNA5SP282-201ENST00000516355 108 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCD3P28288 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.42□□□□□ -2.02
ABCD3P28288 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.42□□□□□ -2.02
ABCD3P28288 AC026470.2-201ENST00000561492 181 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.42□□□□□ -2.02
ABCD3P28288 UBE2V2P2-201ENST00000587677 504 ntBASIC2.42□□□□□ -2.02
ABCD3P28288 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
ABCD3P28288 MTND4P12-201ENST00000498999 1377 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 SNORA72.1-201ENST00000363485 129 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 MIR196B-201ENST00000384852 84 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 SNORA40.19-201ENST00000390846 128 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 MTND4P18-201ENST00000447010 465 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 Y_RNA.635-201ENST00000459041 101 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.41□□□□□ -2.02
ABCD3P28288 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.41□□□□□ -2.02
ABCD3P28288 AC026782.1-201ENST00000512952 449 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 Y_RNA.708-201ENST00000516950 96 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.41□□□□□ -2.02
ABCD3P28288 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.41□□□□□ -2.02
ABCD3P28288 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.41□□□□□ -2.02
ABCD3P28288 AC009127.3-201ENST00000570531 403 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 AC005730.3-201ENST00000583067 366 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 AC243960.4-201ENST00000600532 288 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.41□□□□□ -2.02
ABCD3P28288 MIR6852-201ENST00000621699 66 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 AC092608.2-201ENST00000624427 218 ntBASIC2.41□□□□□ -2.02
ABCD3P28288 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.41□□□□□ -2.02
ABCD3P28288 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
ABCD3P28288 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
ABCD3P28288 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
ABCD3P28288 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ABCD3P28288 ZNF299P-201ENST00000406845 1804 ntBASIC2.4□□□□□ -2.02
ABCD3P28288 Y_RNA.510-201ENST00000384511 114 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.4□□□□□ -2.03
ABCD3P28288 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.4□□□□□ -2.03
ABCD3P28288 AC011816.1-201ENST00000441346 546 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.4□□□□□ -2.03
ABCD3P28288 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.4□□□□□ -2.03
ABCD3P28288 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.4□□□□□ -2.03
ABCD3P28288 PRELID3BP1-201ENST00000457142 540 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.4□□□□□ -2.03
ABCD3P28288 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.4□□□□□ -2.03
ABCD3P28288 ANXA2P1-201ENST00000505539 926 ntBASIC2.4□□□□□ -2.03
ABCD3P28288 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.4□□□□□ -2.03
ABCD3P28288 AL121579.1-201ENST00000555129 305 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms