Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RNU1-95P-201ENST00000516357 160 ntBASIC3.18□□□□□ -1.9
KRT4P19013 RNU1-128P-201ENST00000516704 160 ntBASIC3.18□□□□□ -1.9
KRT4P19013 Y_RNA.777-201ENST00000516982 102 ntBASIC3.18□□□□□ -1.9
KRT4P19013 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.18□□□□□ -1.9
KRT4P19013 MRPS18CP4-201ENST00000535821 231 ntBASIC3.18□□□□□ -1.9
KRT4P19013 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.18□□□□□ -1.9
KRT4P19013 AC010928.2-201ENST00000588017 287 ntBASIC3.18□□□□□ -1.9
KRT4P19013 Y_RNA.771-201ENST00000598668 102 ntBASIC3.18□□□□□ -1.9
KRT4P19013 AC011921.3-201ENST00000605540 361 ntBASIC3.18□□□□□ -1.9
KRT4P19013 U3.45-201ENST00000607547 219 ntBASIC3.18□□□□□ -1.9
KRT4P19013 MIR378J-201ENST00000611988 109 ntBASIC3.18□□□□□ -1.9
KRT4P19013 AC090132.2-201ENST00000615881 347 ntBASIC3.18□□□□□ -1.9
KRT4P19013 Y_RNA.789-201ENST00000622480 102 ntBASIC3.18□□□□□ -1.9
KRT4P19013 SCARNA4-202ENST00000625402 129 ntBASIC3.18□□□□□ -1.9
KRT4P19013 AC009093.8-201ENST00000641769 292 ntBASIC3.18□□□□□ -1.9
KRT4P19013 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRT4P19013 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KRT4P19013 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT4P19013 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT4P19013 UBE2WP1-201ENST00000362030 340 ntBASIC3.17□□□□□ -1.9
KRT4P19013 Y_RNA.8-201ENST00000362353 102 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU6-78P-201ENST00000362897 107 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU6-879P-201ENST00000364328 108 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNA5SP139-201ENST00000364340 117 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU6-926P-201ENST00000384075 107 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU6-968P-201ENST00000384076 107 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU6-318P-201ENST00000384283 103 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU6-21P-201ENST00000384710 107 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU6-918P-201ENST00000391219 106 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU1-139P-201ENST00000391307 165 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RN7SKP51-201ENST00000410781 304 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT4P19013 AL390729.2-201ENST00000416137 156 ntBASIC3.17□□□□□ -1.9
KRT4P19013 NDUFB4P7-201ENST00000423198 363 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AC004975.1-201ENST00000428733 208 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AC007395.1-201ENST00000451333 677 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.17□□□□□ -1.9
KRT4P19013 AP001324.2-201ENST00000461163 319 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT4P19013 AC106707.2-201ENST00000484182 374 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RNU6-572P-201ENST00000516724 80 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.17□□□□□ -1.9
KRT4P19013 H3F3AP1-201ENST00000559984 334 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.17□□□□□ -1.9
KRT4P19013 MIR4423-201ENST00000580922 80 ntBASIC3.17□□□□□ -1.9
KRT4P19013 MIR4276-201ENST00000584832 70 ntBASIC3.17□□□□□ -1.9
KRT4P19013 RPL23AP88-201ENST00000605759 454 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AL121772.2-201ENST00000614331 297 ntBASIC3.17□□□□□ -1.9
KRT4P19013 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.17□□□□□ -1.9
KRT4P19013 AC009541.1-201ENST00000438279 2662 ntBASIC3.17□□□□□ -1.9
KRT4P19013 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT4P19013 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT4P19013 AL353743.1-202ENST00000431724 1695 ntBASIC3.17□□□□□ -1.9
KRT4P19013 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
KRT4P19013 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT4P19013 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KRT4P19013 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KRT4P19013 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
KRT4P19013 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRT4P19013 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
KRT4P19013 Y_RNA.286-201ENST00000364813 102 ntBASIC3.16□□□□□ -1.9
KRT4P19013 Y_RNA.383-201ENST00000383855 97 ntBASIC3.16□□□□□ -1.9
KRT4P19013 RNU6-1286P-201ENST00000383871 107 ntBASIC3.16□□□□□ -1.9
KRT4P19013 Y_RNA.435-201ENST00000384095 112 ntBASIC3.16□□□□□ -1.9
KRT4P19013 SNORA5A-201ENST00000384111 134 ntBASIC3.16□□□□□ -1.9
KRT4P19013 RNU6-198P-201ENST00000384258 104 ntBASIC3.16□□□□□ -1.9
KRT4P19013 RNU6-804P-201ENST00000384286 107 ntBASIC3.16□□□□□ -1.9
KRT4P19013 RNU6-1117P-201ENST00000384525 104 ntBASIC3.16□□□□□ -1.9
KRT4P19013 MIR153-2-201ENST00000385225 87 ntBASIC3.16□□□□□ -1.9
KRT4P19013 RAB9AP3-201ENST00000412737 573 ntBASIC3.16□□□□□ -1.9
KRT4P19013 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT4P19013 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.16□□□□□ -1.9
KRT4P19013 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT4P19013 RAB9AP1-201ENST00000449393 573 ntBASIC3.16□□□□□ -1.9
KRT4P19013 AL353705.4-201ENST00000449661 238 ntBASIC3.16□□□□□ -1.9
KRT4P19013 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT4P19013 NUTF2P7-201ENST00000453086 375 ntBASIC3.16□□□□□ -1.9
KRT4P19013 AC073901.1-201ENST00000462471 408 ntBASIC3.16□□□□□ -1.9
KRT4P19013 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT4P19013 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
KRT4P19013 RNU6-1114P-201ENST00000516022 107 ntBASIC3.16□□□□□ -1.9
KRT4P19013 RN7SKP43-201ENST00000516173 320 ntBASIC3.16□□□□□ -1.9
KRT4P19013 MTND5P41-201ENST00000517498 206 ntBASIC3.16□□□□□ -1.9
KRT4P19013 AL078605.1-201ENST00000603529 500 ntBASIC3.16□□□□□ -1.9
KRT4P19013 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.16□□□□□ -1.9
KRT4P19013 AC108706.1-201ENST00000611053 297 ntBASIC3.16□□□□□ -1.9
KRT4P19013 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
KRT4P19013 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.16□□□□□ -1.9
KRT4P19013 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
KRT4P19013 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.16□□□□□ -1.9
KRT4P19013 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
KRT4P19013 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
KRT4P19013 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.15□□□□□ -1.9
KRT4P19013 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
KRT4P19013 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
KRT4P19013 RNU6-105P-201ENST00000363909 104 ntBASIC3.15□□□□□ -1.91
KRT4P19013 RNU6-72P-201ENST00000384285 79 ntBASIC3.15□□□□□ -1.91
KRT4P19013 RNU4-30P-201ENST00000410245 143 ntBASIC3.15□□□□□ -1.91
KRT4P19013 SNORD12B-201ENST00000410433 91 ntBASIC3.15□□□□□ -1.91
KRT4P19013 EIF1AXP1-201ENST00000419267 435 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms