Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 SNORD98-201ENST00000636377 67 ntBASIC3.17□□□□□ -1.9
ATF3P18847 TPTEP1-208ENST00000636884 213 ntBASIC3.17□□□□□ -1.9
ATF3P18847 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATF3P18847 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.17□□□□□ -1.9
ATF3P18847 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ATF3P18847 RNU1-17P-201ENST00000363022 152 ntBASIC3.16□□□□□ -1.9
ATF3P18847 RNU6-593P-201ENST00000364716 112 ntBASIC3.16□□□□□ -1.9
ATF3P18847 RNU6-142P-201ENST00000384019 107 ntBASIC3.16□□□□□ -1.9
ATF3P18847 Y_RNA.504-201ENST00000384481 104 ntBASIC3.16□□□□□ -1.9
ATF3P18847 MIR548F5-201ENST00000408421 86 ntBASIC3.16□□□□□ -1.9
ATF3P18847 SNORA11.4-201ENST00000408823 129 ntBASIC3.16□□□□□ -1.9
ATF3P18847 MTND4LP11-201ENST00000422184 280 ntBASIC3.16□□□□□ -1.9
ATF3P18847 MTND4P18-201ENST00000447010 465 ntBASIC3.16□□□□□ -1.9
ATF3P18847 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.16□□□□□ -1.9
ATF3P18847 AC104564.1-201ENST00000493028 407 ntBASIC3.16□□□□□ -1.9
ATF3P18847 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.16□□□□□ -1.9
ATF3P18847 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF3P18847 IMMP1LP2-201ENST00000552954 492 ntBASIC3.16□□□□□ -1.9
ATF3P18847 AC021231.3-201ENST00000558497 370 ntBASIC3.16□□□□□ -1.9
ATF3P18847 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.16□□□□□ -1.9
ATF3P18847 AC060766.3-201ENST00000591442 263 ntBASIC3.16□□□□□ -1.9
ATF3P18847 AL034555.1-201ENST00000604816 211 ntBASIC3.16□□□□□ -1.9
ATF3P18847 AL138963.2-201ENST00000605137 226 ntBASIC3.16□□□□□ -1.9
ATF3P18847 MIR3976-201ENST00000606807 139 ntBASIC3.16□□□□□ -1.9
ATF3P18847 AC067747.1-201ENST00000608026 250 ntBASIC3.16□□□□□ -1.9
ATF3P18847 SNORA43.4-201ENST00000629559 138 ntBASIC3.16□□□□□ -1.9
ATF3P18847 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
ATF3P18847 RNU4-56P-201ENST00000364700 142 ntBASIC3.15□□□□□ -1.91
ATF3P18847 Y_RNA.339-201ENST00000365325 102 ntBASIC3.15□□□□□ -1.91
ATF3P18847 SNORA80E-201ENST00000384744 137 ntBASIC3.15□□□□□ -1.91
ATF3P18847 MIR29B2-201ENST00000385055 81 ntBASIC3.15□□□□□ -1.91
ATF3P18847 MIR221-201ENST00000385135 110 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AL023284.1-201ENST00000403956 276 ntBASIC3.15□□□□□ -1.91
ATF3P18847 RN7SKP158-201ENST00000410453 326 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AL590135.1-201ENST00000422215 156 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AC019205.3-201ENST00000424573 156 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AC018634.1-201ENST00000437554 401 ntBASIC3.15□□□□□ -1.91
ATF3P18847 MTATP6P23-201ENST00000440153 476 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AL353572.1-201ENST00000442490 417 ntBASIC3.15□□□□□ -1.91
ATF3P18847 GPM6BP3-201ENST00000442797 145 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AC016700.2-201ENST00000446011 156 ntBASIC3.15□□□□□ -1.91
ATF3P18847 MTND5P20-201ENST00000448677 143 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AC090515.1-201ENST00000465295 476 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AC015911.1-201ENST00000495111 156 ntBASIC3.15□□□□□ -1.91
ATF3P18847 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.15□□□□□ -1.91
ATF3P18847 ACA59.1-201ENST00000515966 143 ntBASIC3.15□□□□□ -1.91
ATF3P18847 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.15□□□□□ -1.91
ATF3P18847 MIR4781-201ENST00000585250 76 ntBASIC3.15□□□□□ -1.91
ATF3P18847 AC092794.2-201ENST00000620933 563 ntBASIC3.15□□□□□ -1.91
ATF3P18847 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ATF3P18847 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.14□□□□□ -1.91
ATF3P18847 RNA5SP125-201ENST00000364843 120 ntBASIC3.14□□□□□ -1.91
ATF3P18847 RNU6-784P-201ENST00000384330 106 ntBASIC3.14□□□□□ -1.91
ATF3P18847 MIR95-201ENST00000385072 81 ntBASIC3.14□□□□□ -1.91
ATF3P18847 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ATF3P18847 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ATF3P18847 AL356432.1-201ENST00000405809 419 ntBASIC3.14□□□□□ -1.91
ATF3P18847 RPS15AP28-201ENST00000435088 386 ntBASIC3.14□□□□□ -1.91
ATF3P18847 RPS3AP52-201ENST00000435639 297 ntBASIC3.14□□□□□ -1.91
ATF3P18847 AL161788.1-201ENST00000441805 169 ntBASIC3.14□□□□□ -1.91
ATF3P18847 AL353752.1-201ENST00000454946 260 ntBASIC3.14□□□□□ -1.91
ATF3P18847 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.14□□□□□ -1.91
ATF3P18847 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.14□□□□□ -1.91
ATF3P18847 RNU6-567P-201ENST00000516746 107 ntBASIC3.14□□□□□ -1.91
ATF3P18847 RNU6-586P-201ENST00000517265 104 ntBASIC3.14□□□□□ -1.91
ATF3P18847 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.14□□□□□ -1.91
ATF3P18847 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ATF3P18847 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.14□□□□□ -1.91
ATF3P18847 MIR6128-201ENST00000615528 109 ntBASIC3.14□□□□□ -1.91
ATF3P18847 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ATF3P18847 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ATF3P18847 Y_RNA.123-201ENST00000363338 102 ntBASIC3.13□□□□□ -1.91
ATF3P18847 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
ATF3P18847 RNU6-306P-201ENST00000384617 107 ntBASIC3.13□□□□□ -1.91
ATF3P18847 RPL37P10-201ENST00000412884 288 ntBASIC3.13□□□□□ -1.91
ATF3P18847 AC090096.1-201ENST00000489168 390 ntBASIC3.13□□□□□ -1.91
ATF3P18847 Y_RNA.702-201ENST00000516843 96 ntBASIC3.13□□□□□ -1.91
ATF3P18847 SNORA48.11-201ENST00000517015 89 ntBASIC3.13□□□□□ -1.91
ATF3P18847 AC090517.3-201ENST00000625170 141 ntBASIC3.13□□□□□ -1.91
ATF3P18847 AL450472.1-202ENST00000637286 180 ntBASIC3.13□□□□□ -1.91
ATF3P18847 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
ATF3P18847 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
ATF3P18847 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATF3P18847 CYCSP49-201ENST00000420810 319 ntBASIC3.12□□□□□ -1.91
ATF3P18847 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.12□□□□□ -1.91
ATF3P18847 RNU7-26P-201ENST00000458980 63 ntBASIC3.12□□□□□ -1.91
ATF3P18847 RNU6-1016P-201ENST00000516689 94 ntBASIC3.12□□□□□ -1.91
ATF3P18847 SNORA31.16-201ENST00000516773 139 ntBASIC3.12□□□□□ -1.91
ATF3P18847 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.12□□□□□ -1.91
ATF3P18847 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.12□□□□□ -1.91
ATF3P18847 FGF7P1-201ENST00000582820 288 ntBASIC3.12□□□□□ -1.91
ATF3P18847 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.12□□□□□ -1.91
ATF3P18847 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.12□□□□□ -1.91
ATF3P18847 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATF3P18847 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
ATF3P18847 snoU2_19.1-201ENST00000362361 80 ntBASIC3.11□□□□□ -1.91
ATF3P18847 Y_RNA.142-201ENST00000363491 102 ntBASIC3.11□□□□□ -1.91
ATF3P18847 RNU6-596P-201ENST00000365395 98 ntBASIC3.11□□□□□ -1.91
ATF3P18847 RNU1-109P-201ENST00000383960 147 ntBASIC3.11□□□□□ -1.91
ATF3P18847 AL591034.2-201ENST00000402839 359 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms