Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MIR3670-1-201ENST00000584160 65 ntBASIC2.6□□□□□ -1.99
CTPS1P17812 MIR3670-3-201ENST00000584855 65 ntBASIC2.6□□□□□ -1.99
CTPS1P17812 AC060766.3-201ENST00000591442 263 ntBASIC2.6□□□□□ -1.99
CTPS1P17812 AC006023.1-201ENST00000603944 259 ntBASIC2.6□□□□□ -1.99
CTPS1P17812 MIR3670-4-201ENST00000612260 65 ntBASIC2.6□□□□□ -1.99
CTPS1P17812 AC090971.5-201ENST00000621102 293 ntBASIC2.6□□□□□ -1.99
CTPS1P17812 MIR6852-201ENST00000621699 66 ntBASIC2.6□□□□□ -1.99
CTPS1P17812 AC233981.2-201ENST00000611524 1614 ntBASIC2.6□□□□□ -1.99
CTPS1P17812 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CTPS1P17812 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CTPS1P17812 OR56A5-201ENST00000340110 738 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 RNU6-1286P-201ENST00000383871 107 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.59□□□□□ -1.99
CTPS1P17812 AC243428.1-201ENST00000421099 264 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.59□□□□□ -1.99
CTPS1P17812 AL353997.1-201ENST00000432936 108 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 MIR2053-201ENST00000459295 91 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 AC090096.1-201ENST00000489168 390 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 AC022447.4-201ENST00000504053 364 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 AC022493.2-201ENST00000506122 481 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.59□□□□□ -1.99
CTPS1P17812 RPPH1-2P-201ENST00000516688 293 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 MRPS36P4-201ENST00000534436 298 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 AC021231.3-201ENST00000558497 370 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 AC005014.2-201ENST00000607795 599 ntBASIC2.59□□□□□ -1.99
CTPS1P17812 AL136360.1-201ENST00000503377 1900 ntBASIC2.58□□□□□ -2
CTPS1P17812 RNU6-655P-201ENST00000362858 107 ntBASIC2.58□□□□□ -2
CTPS1P17812 RNU6-1210P-201ENST00000363775 107 ntBASIC2.58□□□□□ -2
CTPS1P17812 RNU1-109P-201ENST00000383960 147 ntBASIC2.58□□□□□ -2
CTPS1P17812 SNORA26.3-201ENST00000391119 136 ntBASIC2.58□□□□□ -2
CTPS1P17812 AL590135.1-201ENST00000422215 156 ntBASIC2.58□□□□□ -2
CTPS1P17812 AC019205.3-201ENST00000424573 156 ntBASIC2.58□□□□□ -2
CTPS1P17812 MTCO2P12-201ENST00000427426 682 ntBASIC2.58□□□□□ -2
CTPS1P17812 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.58□□□□□ -2
CTPS1P17812 AC016700.2-201ENST00000446011 156 ntBASIC2.58□□□□□ -2
CTPS1P17812 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.58□□□□□ -2
CTPS1P17812 AC015911.1-201ENST00000495111 156 ntBASIC2.58□□□□□ -2
CTPS1P17812 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.58□□□□□ -2
CTPS1P17812 AIG1P1-201ENST00000503376 148 ntBASIC2.58□□□□□ -2
CTPS1P17812 Y_RNA.701-201ENST00000516812 110 ntBASIC2.58□□□□□ -2
CTPS1P17812 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.58□□□□□ -2
CTPS1P17812 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.58□□□□□ -2
CTPS1P17812 MIR5571-201ENST00000577998 113 ntBASIC2.58□□□□□ -2
CTPS1P17812 AC105245.1-201ENST00000581934 244 ntBASIC2.58□□□□□ -2
CTPS1P17812 AC044792.1-201ENST00000593294 196 ntBASIC2.58□□□□□ -2
CTPS1P17812 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.58□□□□□ -2
CTPS1P17812 CYP2C61P-201ENST00000604072 290 ntBASIC2.58□□□□□ -2
CTPS1P17812 AL080274.1-201ENST00000605565 220 ntBASIC2.58□□□□□ -2
CTPS1P17812 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.58□□□□□ -2
CTPS1P17812 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.58□□□□□ -2
CTPS1P17812 SNORD98-201ENST00000636377 67 ntBASIC2.58□□□□□ -2
CTPS1P17812 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.58□□□□□ -2
CTPS1P17812 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.58□□□□□ -2
CTPS1P17812 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
CTPS1P17812 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CTPS1P17812 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CTPS1P17812 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
CTPS1P17812 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
CTPS1P17812 RNU6-595P-201ENST00000363944 107 ntBASIC2.57□□□□□ -2
CTPS1P17812 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
CTPS1P17812 AL358453.1-201ENST00000422522 250 ntBASIC2.57□□□□□ -2
CTPS1P17812 EIF4EP4-201ENST00000424916 578 ntBASIC2.57□□□□□ -2
CTPS1P17812 AIMP1P2-201ENST00000425294 312 ntBASIC2.57□□□□□ -2
CTPS1P17812 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.57□□□□□ -2
CTPS1P17812 AC007677.1-201ENST00000445757 515 ntBASIC2.57□□□□□ -2
CTPS1P17812 AL353705.4-201ENST00000449661 238 ntBASIC2.57□□□□□ -2
CTPS1P17812 AP000705.1-201ENST00000454567 350 ntBASIC2.57□□□□□ -2
CTPS1P17812 AL121594.1-201ENST00000475906 575 ntBASIC2.57□□□□□ -2
CTPS1P17812 RPL30P1-201ENST00000488676 339 ntBASIC2.57□□□□□ -2
CTPS1P17812 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.57□□□□□ -2
CTPS1P17812 RNU5F-2P-201ENST00000516066 82 ntBASIC2.57□□□□□ -2
CTPS1P17812 RNU2-53P-201ENST00000516257 147 ntBASIC2.57□□□□□ -2
CTPS1P17812 RNA5SP148-201ENST00000516527 94 ntBASIC2.57□□□□□ -2
CTPS1P17812 SNORA31.16-201ENST00000516773 139 ntBASIC2.57□□□□□ -2
CTPS1P17812 RNU6-264P-201ENST00000517134 104 ntBASIC2.57□□□□□ -2
CTPS1P17812 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.57□□□□□ -2
CTPS1P17812 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.57□□□□□ -2
CTPS1P17812 MIR3136-201ENST00000583498 78 ntBASIC2.57□□□□□ -2
CTPS1P17812 MIR4719-201ENST00000585233 84 ntBASIC2.57□□□□□ -2
CTPS1P17812 AC069294.1-201ENST00000608397 350 ntBASIC2.57□□□□□ -2
CTPS1P17812 MIR6817-201ENST00000615588 66 ntBASIC2.57□□□□□ -2
CTPS1P17812 AC135776.4-201ENST00000624300 1904 ntBASIC2.57□□□□□ -2
CTPS1P17812 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CTPS1P17812 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.56□□□□□ -2
CTPS1P17812 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.56□□□□□ -2
CTPS1P17812 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.56□□□□□ -2
CTPS1P17812 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CTPS1P17812 MIR369-201ENST00000362155 70 ntBASIC2.56□□□□□ -2
CTPS1P17812 RNY1P16-201ENST00000363063 111 ntBASIC2.56□□□□□ -2
CTPS1P17812 RNA5SP68-201ENST00000363885 119 ntBASIC2.56□□□□□ -2
CTPS1P17812 SNORD42.2-201ENST00000365570 69 ntBASIC2.56□□□□□ -2
CTPS1P17812 SNORA29-201ENST00000384183 140 ntBASIC2.56□□□□□ -2
CTPS1P17812 SNORA36A-201ENST00000384221 132 ntBASIC2.56□□□□□ -2
CTPS1P17812 RNU6-1072P-201ENST00000384703 107 ntBASIC2.56□□□□□ -2
CTPS1P17812 RNU6-443P-201ENST00000384780 107 ntBASIC2.56□□□□□ -2
CTPS1P17812 MIR559-201ENST00000385188 96 ntBASIC2.56□□□□□ -2
CTPS1P17812 AL354751.2-201ENST00000415471 210 ntBASIC2.56□□□□□ -2
CTPS1P17812 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.56□□□□□ -2
CTPS1P17812 AC008267.5-201ENST00000424928 265 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms