Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-290P-201ENST00000365212 101 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL6A2P12110 RNU6-338P-201ENST00000383888 105 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COL6A2P12110 RN7SKP111-201ENST00000410349 271 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 RNU2-49P-201ENST00000410666 184 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 AC112220.1-201ENST00000434628 355 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.42□□□□□ -1.86
COL6A2P12110 AC073901.1-201ENST00000462471 408 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.42□□□□□ -1.86
COL6A2P12110 RNU5F-2P-201ENST00000516066 82 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 AC025281.1-201ENST00000567026 265 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.42□□□□□ -1.86
COL6A2P12110 MIR7851-201ENST00000610611 160 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.42□□□□□ -1.86
COL6A2P12110 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL6A2P12110 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
COL6A2P12110 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL6A2P12110 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL6A2P12110 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
COL6A2P12110 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL6A2P12110 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL6A2P12110 RNA5SP197-201ENST00000363357 119 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 RNU4-56P-201ENST00000364700 142 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 RNU6-245P-201ENST00000384020 107 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 Y_RNA.785-201ENST00000384290 109 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 RNU6-102P-201ENST00000384485 104 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 U8.11-201ENST00000384699 133 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 U8.12-201ENST00000384701 133 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 RNA5SP252-201ENST00000391131 119 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 RNU2-14P-201ENST00000411053 191 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 AL390729.2-201ENST00000416137 156 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 TRIAP1P1-201ENST00000427062 225 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.41□□□□□ -1.86
COL6A2P12110 AC007395.1-201ENST00000451333 677 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 HMGN1P18-201ENST00000457642 277 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 U8.18-201ENST00000459285 133 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 SERF1AP1-201ENST00000514575 187 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 SNORA31.21-201ENST00000517180 77 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.41□□□□□ -1.86
COL6A2P12110 AC022080.3-201ENST00000544433 482 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.41□□□□□ -1.86
COL6A2P12110 AC073476.4-201ENST00000628409 72 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 SNORD98-201ENST00000636377 67 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.41□□□□□ -1.86
COL6A2P12110 MAPK10-362ENST00000641864 4484 ntBASIC3.41□□□□□ -1.86
COL6A2P12110 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL6A2P12110 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
COL6A2P12110 AL161912.2-201ENST00000565707 3007 ntBASIC3.4□□□□□ -1.86
COL6A2P12110 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL6A2P12110 RNU6-626P-201ENST00000363354 107 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 RNU6-529P-201ENST00000363383 104 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 RNU6-873P-201ENST00000363833 107 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 RNU6-326P-201ENST00000365480 107 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
COL6A2P12110 RNU6-1140P-201ENST00000410517 106 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 AC126124.2-201ENST00000413542 321 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.4□□□□□ -1.87
COL6A2P12110 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.4□□□□□ -1.87
COL6A2P12110 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
COL6A2P12110 RNU4-71P-201ENST00000516258 113 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 MIR3923-201ENST00000579521 83 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 AL109918.3-201ENST00000603072 338 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 AC010999.1-201ENST00000611856 324 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 U4.6-201ENST00000621618 127 ntBASIC3.4□□□□□ -1.87
COL6A2P12110 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL6A2P12110 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
COL6A2P12110 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.39□□□□□ -1.87
COL6A2P12110 RNA5SP124-201ENST00000362739 110 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 RNU6-1266P-201ENST00000362794 105 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 SNORD114-19-201ENST00000363072 75 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 SNORD46.1-201ENST00000364139 104 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 Y_RNA.333-201ENST00000365274 102 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 RNU6-805P-201ENST00000365643 106 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 Y_RNA.570-201ENST00000384750 101 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 U3.26-201ENST00000391236 204 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 AL033519.2-201ENST00000403958 392 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 Y_RNA.595-201ENST00000410403 105 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.39□□□□□ -1.87
COL6A2P12110 AIMP1P2-201ENST00000425294 312 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 CYCSP4-201ENST00000429682 331 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 RPL23AP83-201ENST00000434984 473 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 AC010095.1-201ENST00000443543 144 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.39□□□□□ -1.87
COL6A2P12110 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.39□□□□□ -1.87
COL6A2P12110 AC074133.1-201ENST00000515696 183 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 SNORA40.9-201ENST00000515895 93 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 RNU6-138P-201ENST00000515952 107 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 AC233702.2-202ENST00000562547 291 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 AL121772.2-201ENST00000614331 297 ntBASIC3.39□□□□□ -1.87
COL6A2P12110 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.39□□□□□ -1.87
COL6A2P12110 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.39□□□□□ -1.87
COL6A2P12110 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.39□□□□□ -1.87
COL6A2P12110 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.39□□□□□ -1.87
COL6A2P12110 AL356274.2-201ENST00000624379 3752 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
COL6A2P12110 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
COL6A2P12110 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 RNA5SP383-201ENST00000362934 120 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms