Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-1.3□□□□□ -2.62
TOP2AP11388 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-1.3□□□□□ -2.62
TOP2AP11388 RNU4-30P-201ENST00000410245 143 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 AC109327.2-201ENST00000448339 378 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-1.3□□□□□ -2.62
TOP2AP11388 AC079140.3-201ENST00000511111 550 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-1.3□□□□□ -2.62
TOP2AP11388 MIR4320-201ENST00000636981 65 ntBASIC-1.3□□□□□ -2.62
TOP2AP11388 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 MIR548L-201ENST00000408303 86 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.31□□□□□ -2.62
TOP2AP11388 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-1.31□□□□□ -2.62
TOP2AP11388 USP9YP29-201ENST00000445112 563 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 AC092685.1-201ENST00000447960 1243 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 AC012308.1-201ENST00000451232 178 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 AC107297.1-201ENST00000459991 176 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 AC104695.3-201ENST00000604052 296 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 AC012213.4-201ENST00000606457 354 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 AC006504.8-201ENST00000621046 635 ntBASIC-1.31□□□□□ -2.62
TOP2AP11388 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-1.31□□□□□ -2.62
TOP2AP11388 SNORD114-14-201ENST00000362723 75 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 MIR573-201ENST00000384964 99 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 RNU6-1176P-201ENST00000390955 107 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 AL133475.1-201ENST00000404414 305 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 SNORD83.1-201ENST00000411362 77 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 C1DP2-201ENST00000418167 426 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 TMSB4XP1-201ENST00000424567 135 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 MTCO1P19-201ENST00000443487 500 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 C1DP4-201ENST00000455429 424 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 MTCYBP40-201ENST00000509390 1135 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC-1.32□□□□□ -2.62
TOP2AP11388 SUB1P2-201ENST00000556401 297 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 AC004853.1-201ENST00000604902 698 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 AC018926.3-201ENST00000618841 406 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 MIR6755-201ENST00000619993 66 ntBASIC-1.32□□□□□ -2.62
TOP2AP11388 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-1.32□□□□□ -2.62
TOP2AP11388 RNU5A-1-201ENST00000362698 116 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 RNU6-730P-201ENST00000383954 104 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 AL034345.1-201ENST00000407768 123 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 RNA5SP163-201ENST00000410304 99 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-1.33□□□□□ -2.62
TOP2AP11388 TXNL1P1-201ENST00000429528 554 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 RPL26P6-201ENST00000440913 438 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 AC002381.1-201ENST00000447049 280 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 CECR9-201ENST00000453421 199 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 OFD1P7Y-201ENST00000454643 1155 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 AC097473.1-201ENST00000508142 408 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 RNU4ATAC10P-201ENST00000516967 122 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 AP000811.1-201ENST00000603803 651 ntBASIC-1.33□□□□□ -2.62
TOP2AP11388 RNU6-1123P-201ENST00000362347 106 ntBASIC-1.34□□□□□ -2.62
TOP2AP11388 SNORD114-11-201ENST00000363738 75 ntBASIC-1.34□□□□□ -2.62
TOP2AP11388 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
TOP2AP11388 SCARNA15.2-201ENST00000516409 127 ntBASIC-1.34□□□□□ -2.62
TOP2AP11388 RN7SKP256-201ENST00000517201 314 ntBASIC-1.34□□□□□ -2.62
TOP2AP11388 MTND4LP26-201ENST00000518144 282 ntBASIC-1.34□□□□□ -2.62
TOP2AP11388 AC027419.1-201ENST00000522976 328 ntBASIC-1.34□□□□□ -2.62
TOP2AP11388 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.34□□□□□ -2.62
TOP2AP11388 AC023827.1-201ENST00000569247 97 ntBASIC-1.34□□□□□ -2.62
TOP2AP11388 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-1.34□□□□□ -2.62
TOP2AP11388 RNU6-925P-201ENST00000384629 104 ntBASIC-1.35□□□□□ -2.62
TOP2AP11388 USP9YP13-201ENST00000417797 480 ntBASIC-1.35□□□□□ -2.62
TOP2AP11388 AC116562.3-201ENST00000506136 177 ntBASIC-1.35□□□□□ -2.62
TOP2AP11388 NAMPTP3-201ENST00000569273 224 ntBASIC-1.35□□□□□ -2.62
TOP2AP11388 AL590396.4-201ENST00000636779 956 ntBASIC-1.35□□□□□ -2.62
TOP2AP11388 RNU6-743P-201ENST00000364151 106 ntBASIC-1.35□□□□□ -2.63
TOP2AP11388 SNORA3B-201ENST00000391305 131 ntBASIC-1.35□□□□□ -2.63
TOP2AP11388 COX6CP10-201ENST00000416832 224 ntBASIC-1.35□□□□□ -2.63
TOP2AP11388 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.35□□□□□ -2.63
TOP2AP11388 AC024589.1-201ENST00000512207 263 ntBASIC-1.35□□□□□ -2.63
TOP2AP11388 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC-1.35□□□□□ -2.63
TOP2AP11388 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-1.35□□□□□ -2.63
TOP2AP11388 AC018462.2-201ENST00000605375 395 ntBASIC-1.35□□□□□ -2.63
TOP2AP11388 uc_338.16-201ENST00000621804 95 ntBASIC-1.35□□□□□ -2.63
TOP2AP11388 AL109659.3-201ENST00000624985 950 ntBASIC-1.35□□□□□ -2.63
TOP2AP11388 MIR6079-201ENST00000635807 62 ntBASIC-1.35□□□□□ -2.63
TOP2AP11388 SNORA63D-201ENST00000364359 132 ntBASIC-1.36□□□□□ -2.63
TOP2AP11388 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.36□□□□□ -2.63
TOP2AP11388 MIR454-201ENST00000390180 115 ntBASIC-1.36□□□□□ -2.63
TOP2AP11388 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
TOP2AP11388 USP9YP25-201ENST00000457708 443 ntBASIC-1.36□□□□□ -2.63
TOP2AP11388 AC027338.1-201ENST00000514840 825 ntBASIC-1.36□□□□□ -2.63
TOP2AP11388 SNORA70.12-201ENST00000516084 153 ntBASIC-1.36□□□□□ -2.63
TOP2AP11388 RNU6-180P-201ENST00000516697 61 ntBASIC-1.36□□□□□ -2.63
TOP2AP11388 RNU6-922P-201ENST00000516753 99 ntBASIC-1.36□□□□□ -2.63
TOP2AP11388 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.37□□□□□ -2.63
TOP2AP11388 RNU6-72P-201ENST00000384285 79 ntBASIC-1.37□□□□□ -2.63
TOP2AP11388 SNORA8.2-201ENST00000384372 139 ntBASIC-1.37□□□□□ -2.63
TOP2AP11388 AL079342.2-201ENST00000403367 482 ntBASIC-1.37□□□□□ -2.63
TOP2AP11388 snoU13.30-201ENST00000458951 104 ntBASIC-1.37□□□□□ -2.63
TOP2AP11388 OR9P1P-201ENST00000496431 281 ntBASIC-1.37□□□□□ -2.63
TOP2AP11388 MTND5P13-201ENST00000513046 1079 ntBASIC-1.37□□□□□ -2.63
TOP2AP11388 AC080188.3-201ENST00000624842 748 ntBASIC-1.37□□□□□ -2.63
TOP2AP11388 RNA5SP192-201ENST00000364404 120 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 Y_RNA.330-201ENST00000365230 109 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 RNU6-741P-201ENST00000383889 107 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 RNA5SP118-201ENST00000410385 109 ntBASIC-1.38□□□□□ -2.63
TOP2AP11388 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms