Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 UBE2V1P4-201ENST00000425374 344 ntBASIC1.85□□□□□ -2.11
TOP1P11387 AL603825.1-201ENST00000438481 80 ntBASIC1.85□□□□□ -2.11
TOP1P11387 FGF7P6-202ENST00000451282 293 ntBASIC1.85□□□□□ -2.11
TOP1P11387 MTCO3P38-201ENST00000468910 766 ntBASIC1.85□□□□□ -2.11
TOP1P11387 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.85□□□□□ -2.11
TOP1P11387 LRRC34P2-201ENST00000514850 553 ntBASIC1.85□□□□□ -2.11
TOP1P11387 RNU6-1038P-201ENST00000516516 104 ntBASIC1.85□□□□□ -2.11
TOP1P11387 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.85□□□□□ -2.11
TOP1P11387 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.85□□□□□ -2.11
TOP1P11387 AC092325.1-201ENST00000566449 554 ntBASIC1.85□□□□□ -2.11
TOP1P11387 MIR4303-201ENST00000581299 66 ntBASIC1.85□□□□□ -2.11
TOP1P11387 AC010928.2-201ENST00000588017 287 ntBASIC1.85□□□□□ -2.11
TOP1P11387 AC107304.1-201ENST00000604229 296 ntBASIC1.85□□□□□ -2.11
TOP1P11387 RMST_3.1-201ENST00000611651 109 ntBASIC1.85□□□□□ -2.11
TOP1P11387 AC092794.1-201ENST00000612734 582 ntBASIC1.85□□□□□ -2.11
TOP1P11387 RMST_4.1-201ENST00000616886 107 ntBASIC1.85□□□□□ -2.11
TOP1P11387 AC024614.3-201ENST00000637860 256 ntBASIC1.85□□□□□ -2.11
TOP1P11387 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
TOP1P11387 RNU6-942P-201ENST00000363002 107 ntBASIC1.84□□□□□ -2.11
TOP1P11387 Y_RNA.89-201ENST00000363031 102 ntBASIC1.84□□□□□ -2.11
TOP1P11387 Y_RNA.140-201ENST00000363474 103 ntBASIC1.84□□□□□ -2.11
TOP1P11387 RNU6-534P-201ENST00000364877 106 ntBASIC1.84□□□□□ -2.11
TOP1P11387 RNU6-546P-201ENST00000383991 107 ntBASIC1.84□□□□□ -2.11
TOP1P11387 MIR514A2-201ENST00000385131 88 ntBASIC1.84□□□□□ -2.11
TOP1P11387 MIR514A3-201ENST00000385132 88 ntBASIC1.84□□□□□ -2.11
TOP1P11387 RNU2-32P-201ENST00000411193 191 ntBASIC1.84□□□□□ -2.11
TOP1P11387 POLHP1-201ENST00000411806 470 ntBASIC1.84□□□□□ -2.11
TOP1P11387 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.84□□□□□ -2.11
TOP1P11387 AL627311.1-201ENST00000431514 115 ntBASIC1.84□□□□□ -2.11
TOP1P11387 IFNA20P-201ENST00000436840 528 ntBASIC1.84□□□□□ -2.11
TOP1P11387 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.84□□□□□ -2.11
TOP1P11387 snoU109.2-201ENST00000459316 135 ntBASIC1.84□□□□□ -2.11
TOP1P11387 AC092989.1-201ENST00000481235 277 ntBASIC1.84□□□□□ -2.11
TOP1P11387 RNA5SP458-201ENST00000516188 119 ntBASIC1.84□□□□□ -2.11
TOP1P11387 SNORA25.17-201ENST00000517184 124 ntBASIC1.84□□□□□ -2.11
TOP1P11387 MTND1P35-201ENST00000526739 508 ntBASIC1.84□□□□□ -2.11
TOP1P11387 AC109635.3-201ENST00000529536 185 ntBASIC1.84□□□□□ -2.11
TOP1P11387 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.84□□□□□ -2.11
TOP1P11387 CR383656.8-201ENST00000549046 145 ntBASIC1.84□□□□□ -2.11
TOP1P11387 BNIP3P6-201ENST00000549284 499 ntBASIC1.84□□□□□ -2.11
TOP1P11387 AC090115.3-201ENST00000553218 849 ntBASIC1.84□□□□□ -2.11
TOP1P11387 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.84□□□□□ -2.11
TOP1P11387 AC103810.8-201ENST00000607347 118 ntBASIC1.84□□□□□ -2.11
TOP1P11387 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TOP1P11387 uc_338.34-201ENST00000617467 174 ntBASIC1.84□□□□□ -2.11
TOP1P11387 AC022418.1-201ENST00000624118 445 ntBASIC1.84□□□□□ -2.11
TOP1P11387 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TOP1P11387 RNU6-661P-201ENST00000362409 107 ntBASIC1.83□□□□□ -2.12
TOP1P11387 SNORD115-3-201ENST00000363100 82 ntBASIC1.83□□□□□ -2.12
TOP1P11387 RNU6-522P-201ENST00000364497 107 ntBASIC1.83□□□□□ -2.12
TOP1P11387 Y_RNA.378-201ENST00000365652 113 ntBASIC1.83□□□□□ -2.12
TOP1P11387 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TOP1P11387 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TOP1P11387 RNU11-3P-201ENST00000391111 133 ntBASIC1.83□□□□□ -2.12
TOP1P11387 AL606923.1-201ENST00000406616 190 ntBASIC1.83□□□□□ -2.12
TOP1P11387 OR9R1P-201ENST00000412200 877 ntBASIC1.83□□□□□ -2.12
TOP1P11387 PGBD4P6-201ENST00000421501 610 ntBASIC1.83□□□□□ -2.12
TOP1P11387 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.83□□□□□ -2.12
TOP1P11387 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.83□□□□□ -2.12
TOP1P11387 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.83□□□□□ -2.12
TOP1P11387 AMD1P1-201ENST00000457220 922 ntBASIC1.83□□□□□ -2.12
TOP1P11387 AC027575.1-201ENST00000481064 460 ntBASIC1.83□□□□□ -2.12
TOP1P11387 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.83□□□□□ -2.12
TOP1P11387 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.83□□□□□ -2.12
TOP1P11387 AC074344.1-201ENST00000512823 224 ntBASIC1.83□□□□□ -2.12
TOP1P11387 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.83□□□□□ -2.12
TOP1P11387 MTND4P7-201ENST00000523876 130 ntBASIC1.83□□□□□ -2.12
TOP1P11387 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.83□□□□□ -2.12
TOP1P11387 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.83□□□□□ -2.12
TOP1P11387 SNORD53B-201ENST00000577887 78 ntBASIC1.83□□□□□ -2.12
TOP1P11387 MIR5692A1-201ENST00000580523 69 ntBASIC1.83□□□□□ -2.12
TOP1P11387 AC010525.2-201ENST00000590920 195 ntBASIC1.83□□□□□ -2.12
TOP1P11387 BX248123.2-201ENST00000606318 124 ntBASIC1.83□□□□□ -2.12
TOP1P11387 RNU6-89P-201ENST00000606519 100 ntBASIC1.83□□□□□ -2.12
TOP1P11387 AC068944.2-201ENST00000610373 403 ntBASIC1.83□□□□□ -2.12
TOP1P11387 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TOP1P11387 U6.42-201ENST00000618440 107 ntBASIC1.83□□□□□ -2.12
TOP1P11387 RMST_7.1-201ENST00000621935 268 ntBASIC1.83□□□□□ -2.12
TOP1P11387 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
TOP1P11387 MTND4P14-201ENST00000435799 1354 ntBASIC1.83□□□□□ -2.12
TOP1P11387 RNU6-72P-201ENST00000384285 79 ntBASIC1.82□□□□□ -2.12
TOP1P11387 RNU6-434P-201ENST00000384376 107 ntBASIC1.82□□□□□ -2.12
TOP1P11387 MIR10A-201ENST00000385043 110 ntBASIC1.82□□□□□ -2.12
TOP1P11387 MIR934-201ENST00000401241 83 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AC009310.1-201ENST00000414414 451 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP1P11387 SEPT14P3-201ENST00000439401 183 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.82□□□□□ -2.12
TOP1P11387 PRPS1P1-201ENST00000445305 876 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AL732372.2-207ENST00000445840 183 ntBASIC1.82□□□□□ -2.12
TOP1P11387 SEPT14P2-201ENST00000453405 183 ntBASIC1.82□□□□□ -2.12
TOP1P11387 RNU7-167P-201ENST00000459160 62 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AC069439.1-201ENST00000494739 167 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP1P11387 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP1P11387 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.82□□□□□ -2.12
TOP1P11387 SEPT14P4-201ENST00000513445 186 ntBASIC1.82□□□□□ -2.12
TOP1P11387 SNORD60.2-201ENST00000516883 86 ntBASIC1.82□□□□□ -2.12
TOP1P11387 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.82□□□□□ -2.12
TOP1P11387 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms