Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNU6-78P-201ENST00000362897 107 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 Y_RNA.557-201ENST00000384680 107 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 MIR518D-201ENST00000385014 87 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HOXC6P09630 MIR1289-2-201ENST00000408360 111 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 RNU6-1156P-201ENST00000410365 100 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 RNU2-23P-201ENST00000410545 195 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 HMGB3P2-201ENST00000411913 584 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.75□□□□□ -1.97
HOXC6P09630 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.75□□□□□ -1.97
HOXC6P09630 AC013470.1-201ENST00000453438 462 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 RNU7-169P-201ENST00000459456 61 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 RNA5SP281-201ENST00000516504 135 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 RNU6-612P-201ENST00000516909 102 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 AC021269.2-201ENST00000532318 330 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 AC007536.1-201ENST00000533382 349 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 AC015712.3-201ENST00000559380 164 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 MIR1244-1-201ENST00000612829 85 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 AC004852.3-201ENST00000614131 326 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.75□□□□□ -1.97
HOXC6P09630 MIR1244-3-201ENST00000635744 85 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 MIR1244-2-201ENST00000636449 85 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 MIR1244-4-202ENST00000636813 85 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 U4.7-201ENST00000638126 106 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 AC241585.2-209ENST00000638217 143 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HOXC6P09630 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC6P09630 AC005592.1-201ENST00000566527 1640 ntBASIC2.75□□□□□ -1.97
HOXC6P09630 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXC6P09630 MTND5P6-201ENST00000422338 1798 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC6P09630 SNORD50.1-201ENST00000362987 71 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 SNORA14A-201ENST00000364773 135 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 U8.9-201ENST00000365667 134 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC6P09630 MTCYBP10-201ENST00000424905 650 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 AC096638.1-201ENST00000444678 216 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 OR2AQ1P-201ENST00000451972 200 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 BTF3P15-201ENST00000455606 336 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 U8.20-201ENST00000459445 131 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 RPS29P27-201ENST00000463711 170 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC6P09630 CKS1BP7-201ENST00000522230 235 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 AL117187.1-201ENST00000555482 181 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.74□□□□□ -1.97
HOXC6P09630 AP000787.2-201ENST00000604432 568 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 HSPE1P7-201ENST00000604681 321 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC6P09630 MIR6733-201ENST00000635723 61 ntBASIC2.74□□□□□ -1.97
HOXC6P09630 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC6P09630 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC6P09630 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.74□□□□□ -1.97
HOXC6P09630 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HOXC6P09630 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC6P09630 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC6P09630 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC6P09630 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC6P09630 SNORD114-1-201ENST00000362705 72 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 Y_RNA.153-201ENST00000363615 91 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 AC117470.1-201ENST00000381974 330 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 Y_RNA.389-201ENST00000383924 113 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 RNU6-463P-201ENST00000384340 107 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 MIR764-201ENST00000390811 85 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC6P09630 AL591034.2-201ENST00000402839 359 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 U3.37-201ENST00000408528 213 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC6P09630 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC6P09630 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC6P09630 IPO7P1-201ENST00000442031 636 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 U8.21-201ENST00000459536 136 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 SNORA43.2-201ENST00000516652 128 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 RNU6-56P-201ENST00000516986 93 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 AC109479.2-201ENST00000517842 174 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC6P09630 MIR4503-201ENST00000582187 83 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 AC023043.3-201ENST00000593113 385 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 MIR8076-201ENST00000611401 83 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXC6P09630 AL132822.1-201ENST00000617063 513 ntBASIC2.73□□□□□ -1.97
HOXC6P09630 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC6P09630 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HOXC6P09630 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC6P09630 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXC6P09630 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC6P09630 AC007336.1-201ENST00000576365 3828 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 RNU6-942P-201ENST00000363002 107 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 RNU6-527P-201ENST00000363425 104 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 RNU1-115P-201ENST00000365329 160 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 MIR548F4-201ENST00000408515 105 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC6P09630 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC6P09630 HMGN2P30-201ENST00000423237 256 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 AL591806.2-201ENST00000433122 173 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 HMGN2P3-201ENST00000433603 273 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 HMGN2P5-201ENST00000436882 273 ntBASIC2.72□□□□□ -1.97
HOXC6P09630 AC099799.1-201ENST00000439809 192 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms