Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-660P-201ENST00000364566 109 ntBASIC0.86□□□□□ -2.27
TPM1P09493 MIR23A-201ENST00000385245 73 ntBASIC0.86□□□□□ -2.27
TPM1P09493 MIR100-201ENST00000385259 80 ntBASIC0.86□□□□□ -2.27
TPM1P09493 SNORA40.4-201ENST00000390971 128 ntBASIC0.86□□□□□ -2.27
TPM1P09493 MRPL42P2-201ENST00000403169 426 ntBASIC0.86□□□□□ -2.27
TPM1P09493 RNU2-64P-201ENST00000411315 191 ntBASIC0.86□□□□□ -2.27
TPM1P09493 AC006461.1-201ENST00000412637 326 ntBASIC0.86□□□□□ -2.27
TPM1P09493 AL133396.1-201ENST00000432048 687 ntBASIC0.86□□□□□ -2.27
TPM1P09493 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.86□□□□□ -2.27
TPM1P09493 RPS4XP11-201ENST00000446897 772 ntBASIC0.86□□□□□ -2.27
TPM1P09493 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.86□□□□□ -2.27
TPM1P09493 RPL39P38-201ENST00000467018 153 ntBASIC0.86□□□□□ -2.27
TPM1P09493 AC034244.1-201ENST00000507687 207 ntBASIC0.86□□□□□ -2.27
TPM1P09493 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.86□□□□□ -2.27
TPM1P09493 AC112206.4-201ENST00000515142 405 ntBASIC0.86□□□□□ -2.27
TPM1P09493 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
TPM1P09493 AC023050.3-201ENST00000541142 333 ntBASIC0.86□□□□□ -2.27
TPM1P09493 CYP4A27P-201ENST00000567218 190 ntBASIC0.86□□□□□ -2.27
TPM1P09493 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
TPM1P09493 AC008945.2-201ENST00000606056 604 ntBASIC0.86□□□□□ -2.27
TPM1P09493 AC104010.1-201ENST00000616889 150 ntBASIC0.86□□□□□ -2.27
TPM1P09493 AL031667.3-201ENST00000620124 655 ntBASIC0.86□□□□□ -2.27
TPM1P09493 MIR338-201ENST00000636369 67 ntBASIC0.86□□□□□ -2.27
TPM1P09493 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
TPM1P09493 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TPM1P09493 RPL23AP95-201ENST00000426806 265 ntBASIC0.85□□□□□ -2.27
TPM1P09493 AC002486.1-201ENST00000435098 391 ntBASIC0.85□□□□□ -2.27
TPM1P09493 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.85□□□□□ -2.27
TPM1P09493 GAPDHP17-201ENST00000449858 1001 ntBASIC0.85□□□□□ -2.27
TPM1P09493 AC013470.1-201ENST00000453438 462 ntBASIC0.85□□□□□ -2.27
TPM1P09493 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.85□□□□□ -2.27
TPM1P09493 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.85□□□□□ -2.27
TPM1P09493 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.85□□□□□ -2.27
TPM1P09493 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.85□□□□□ -2.27
TPM1P09493 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
TPM1P09493 AC104136.1-201ENST00000512969 394 ntBASIC0.85□□□□□ -2.27
TPM1P09493 AC090517.1-201ENST00000569307 266 ntBASIC0.85□□□□□ -2.27
TPM1P09493 MIR4742-201ENST00000581069 85 ntBASIC0.85□□□□□ -2.27
TPM1P09493 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.85□□□□□ -2.27
TPM1P09493 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TPM1P09493 RNU6-552P-201ENST00000362869 119 ntBASIC0.84□□□□□ -2.27
TPM1P09493 RNU6-428P-201ENST00000362942 107 ntBASIC0.84□□□□□ -2.27
TPM1P09493 Y_RNA.576-201ENST00000384781 102 ntBASIC0.84□□□□□ -2.27
TPM1P09493 RNU11-5P-201ENST00000391216 129 ntBASIC0.84□□□□□ -2.27
TPM1P09493 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.27
TPM1P09493 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.84□□□□□ -2.27
TPM1P09493 AC084290.1-201ENST00000434995 374 ntBASIC0.84□□□□□ -2.27
TPM1P09493 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.84□□□□□ -2.27
TPM1P09493 AC016632.1-201ENST00000503994 196 ntBASIC0.84□□□□□ -2.27
TPM1P09493 RNU6-567P-201ENST00000516746 107 ntBASIC0.84□□□□□ -2.27
TPM1P09493 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.84□□□□□ -2.27
TPM1P09493 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.84□□□□□ -2.27
TPM1P09493 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.84□□□□□ -2.27
TPM1P09493 AC091489.2-201ENST00000566263 604 ntBASIC0.84□□□□□ -2.27
TPM1P09493 TMF1P1-201ENST00000576058 373 ntBASIC0.84□□□□□ -2.27
TPM1P09493 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TPM1P09493 Z98751.3-201ENST00000604447 521 ntBASIC0.84□□□□□ -2.27
TPM1P09493 AC009994.1-201ENST00000606889 253 ntBASIC0.84□□□□□ -2.27
TPM1P09493 BX322639.1-202ENST00000423987 2213 ntBASIC0.83□□□□□ -2.28
TPM1P09493 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
TPM1P09493 Y_RNA.327-201ENST00000365201 102 ntBASIC0.83□□□□□ -2.28
TPM1P09493 RNU6-418P-201ENST00000384035 107 ntBASIC0.83□□□□□ -2.28
TPM1P09493 RNU6-83P-201ENST00000384568 112 ntBASIC0.83□□□□□ -2.28
TPM1P09493 RPS29P13-201ENST00000402041 169 ntBASIC0.83□□□□□ -2.28
TPM1P09493 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.83□□□□□ -2.28
TPM1P09493 RAB28P5-201ENST00000427490 651 ntBASIC0.83□□□□□ -2.28
TPM1P09493 SNAP23P1-201ENST00000433229 246 ntBASIC0.83□□□□□ -2.28
TPM1P09493 USP9YP28-201ENST00000435142 589 ntBASIC0.83□□□□□ -2.28
TPM1P09493 GTF2IP13-201ENST00000438487 386 ntBASIC0.83□□□□□ -2.28
TPM1P09493 Z73417.1-201ENST00000447373 778 ntBASIC0.83□□□□□ -2.28
TPM1P09493 AL163540.1-201ENST00000485382 386 ntBASIC0.83□□□□□ -2.28
TPM1P09493 HMGN1P12-201ENST00000499125 195 ntBASIC0.83□□□□□ -2.28
TPM1P09493 SNORA31.4-201ENST00000516049 129 ntBASIC0.83□□□□□ -2.28
TPM1P09493 RNU2-34P-201ENST00000516534 121 ntBASIC0.83□□□□□ -2.28
TPM1P09493 SUMO2P16-201ENST00000519475 264 ntBASIC0.83□□□□□ -2.28
TPM1P09493 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
TPM1P09493 AC064872.1-201ENST00000604823 1072 ntBASIC0.83□□□□□ -2.28
TPM1P09493 AC005520.5-201ENST00000613926 164 ntBASIC0.83□□□□□ -2.28
TPM1P09493 AL133216.2-202ENST00000634512 349 ntBASIC0.83□□□□□ -2.28
TPM1P09493 AL450472.1-202ENST00000637286 180 ntBASIC0.83□□□□□ -2.28
TPM1P09493 AL445984.1-201ENST00000637834 659 ntBASIC0.83□□□□□ -2.28
TPM1P09493 AC008163.1-202ENST00000636004 2889 ntBASIC0.83□□□□□ -2.28
TPM1P09493 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.82□□□□□ -2.28
TPM1P09493 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TPM1P09493 Y_RNA.140-201ENST00000363474 103 ntBASIC0.82□□□□□ -2.28
TPM1P09493 RNU6-116P-201ENST00000384042 109 ntBASIC0.82□□□□□ -2.28
TPM1P09493 Y_RNA.608-201ENST00000410647 95 ntBASIC0.82□□□□□ -2.28
TPM1P09493 C1DP4-201ENST00000455429 424 ntBASIC0.82□□□□□ -2.28
TPM1P09493 snoU109.3-201ENST00000459477 145 ntBASIC0.82□□□□□ -2.28
TPM1P09493 ARL2BPP4-201ENST00000506854 471 ntBASIC0.82□□□□□ -2.28
TPM1P09493 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.82□□□□□ -2.28
TPM1P09493 RNU6-197P-201ENST00000516680 100 ntBASIC0.82□□□□□ -2.28
TPM1P09493 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.82□□□□□ -2.28
TPM1P09493 MTCO2P2-201ENST00000591258 225 ntBASIC0.82□□□□□ -2.28
TPM1P09493 AC105129.3-201ENST00000605455 485 ntBASIC0.82□□□□□ -2.28
TPM1P09493 AC018645.2-201ENST00000609151 472 ntBASIC0.82□□□□□ -2.28
TPM1P09493 AL157392.4-201ENST00000609756 345 ntBASIC0.82□□□□□ -2.28
TPM1P09493 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
TPM1P09493 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
TPM1P09493 RNU4-79P-201ENST00000362764 141 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms