Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RPL23AP62-201ENST00000463396 453 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.9□□□□□ -1.79
PDGFAP04085 RNA5SP446-201ENST00000515955 82 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.9□□□□□ -1.79
PDGFAP04085 AC091178.1-203ENST00000584586 279 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.9□□□□□ -1.79
PDGFAP04085 AC013791.1-201ENST00000616619 62 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 CR392039.5-201ENST00000623201 510 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PDGFAP04085 AC012442.3-202ENST00000636742 206 ntBASIC3.9□□□□□ -1.79
PDGFAP04085 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PDGFAP04085 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
PDGFAP04085 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PDGFAP04085 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
PDGFAP04085 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFAP04085 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PDGFAP04085 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFAP04085 MIR423-201ENST00000362201 94 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 RNA5SP124-201ENST00000362739 110 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 Y_RNA.343-201ENST00000365354 112 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 RNU6-1130P-201ENST00000365434 107 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 RNU6-1081P-201ENST00000384537 107 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 SNORA12-201ENST00000391162 147 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 RNU6ATAC-201ENST00000408749 126 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 MTATP6P29-201ENST00000415057 132 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 AL139281.1-201ENST00000422120 335 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 RN7SKP164-201ENST00000516138 266 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 AC022655.2-201ENST00000577280 318 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFAP04085 AC008739.2-201ENST00000597006 317 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 AL138721.1-201ENST00000616756 179 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFAP04085 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFAP04085 U6.115-201ENST00000636045 103 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFAP04085 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFAP04085 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
PDGFAP04085 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PDGFAP04085 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFAP04085 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
PDGFAP04085 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFAP04085 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFAP04085 AL353746.1-201ENST00000566293 6881 ntBASIC3.89□□□□□ -1.79
PDGFAP04085 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFAP04085 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFAP04085 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PDGFAP04085 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFAP04085 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
PDGFAP04085 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFAP04085 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFAP04085 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PDGFAP04085 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFAP04085 RNU1-15P-201ENST00000353977 144 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 Y_RNA.333-201ENST00000365274 102 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 RNU6-81P-201ENST00000365608 104 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 SNORA72.4-201ENST00000384174 132 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 MIR29B2-201ENST00000385055 81 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 SNORA26.5-201ENST00000391215 123 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 RNA5SP354-201ENST00000391247 136 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 RNU6-855P-201ENST00000410395 104 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 EIF4EP4-201ENST00000424916 578 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 YME1L1P1-201ENST00000429435 297 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 Z98742.2-201ENST00000431564 187 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.88□□□□□ -1.79
PDGFAP04085 AL500522.2-201ENST00000448562 343 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 RPS29P2-201ENST00000479278 136 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 Y_RNA.797-201ENST00000515977 94 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 SNORA70.12-201ENST00000516084 153 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFAP04085 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFAP04085 MIR3684-201ENST00000579779 74 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFAP04085 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFAP04085 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFAP04085 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFAP04085 ZNF962P-201ENST00000443465 3140 ntBASIC3.88□□□□□ -1.79
PDGFAP04085 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFAP04085 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFAP04085 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFAP04085 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFAP04085 RNU6-899P-201ENST00000363947 107 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 SNORD46.1-201ENST00000364139 104 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 RNU4-84P-201ENST00000364200 139 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 RNU6-1305P-201ENST00000364353 104 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 RNU6-275P-201ENST00000364910 107 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 Y_RNA.368-201ENST00000365547 113 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 SNORA8.3-201ENST00000384679 139 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 MIR586-201ENST00000385035 97 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 RNU6-381P-201ENST00000391259 108 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 AL357075.1-201ENST00000404107 726 ntBASIC3.87□□□□□ -1.79
PDGFAP04085 SEPT7P4-201ENST00000437076 306 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms