Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 AC103810.1-201ENST00000579873 453 ntBASIC2.22□□□□□ -2.05
NGFP01138 MIR3136-201ENST00000583498 78 ntBASIC2.22□□□□□ -2.05
NGFP01138 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.22□□□□□ -2.05
NGFP01138 AC022140.2-201ENST00000623500 188 ntBASIC2.22□□□□□ -2.05
NGFP01138 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.22□□□□□ -2.05
NGFP01138 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NGFP01138 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NGFP01138 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
NGFP01138 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
NGFP01138 RNU6-1210P-201ENST00000363775 107 ntBASIC2.21□□□□□ -2.06
NGFP01138 RNU6-1040P-201ENST00000383974 107 ntBASIC2.21□□□□□ -2.06
NGFP01138 SNORA29-201ENST00000384183 140 ntBASIC2.21□□□□□ -2.06
NGFP01138 Y_RNA.533-201ENST00000384596 114 ntBASIC2.21□□□□□ -2.06
NGFP01138 MIR559-201ENST00000385188 96 ntBASIC2.21□□□□□ -2.06
NGFP01138 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
NGFP01138 CBX3P9-201ENST00000402326 552 ntBASIC2.21□□□□□ -2.06
NGFP01138 RPL19P1-201ENST00000411635 428 ntBASIC2.21□□□□□ -2.06
NGFP01138 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.21□□□□□ -2.06
NGFP01138 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.21□□□□□ -2.06
NGFP01138 RN7SL499P-201ENST00000481141 276 ntBASIC2.21□□□□□ -2.06
NGFP01138 RPL30P10-201ENST00000488148 337 ntBASIC2.21□□□□□ -2.06
NGFP01138 SRIP1-201ENST00000489235 288 ntBASIC2.21□□□□□ -2.06
NGFP01138 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.21□□□□□ -2.06
NGFP01138 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.21□□□□□ -2.06
NGFP01138 RNU6-470P-201ENST00000515954 104 ntBASIC2.21□□□□□ -2.06
NGFP01138 RNU6-1170P-201ENST00000515974 106 ntBASIC2.21□□□□□ -2.06
NGFP01138 RNU5F-2P-201ENST00000516066 82 ntBASIC2.21□□□□□ -2.06
NGFP01138 Y_RNA.701-201ENST00000516812 110 ntBASIC2.21□□□□□ -2.06
NGFP01138 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.21□□□□□ -2.06
NGFP01138 AC093249.1-201ENST00000567049 203 ntBASIC2.21□□□□□ -2.06
NGFP01138 AC044792.1-201ENST00000593294 196 ntBASIC2.21□□□□□ -2.06
NGFP01138 AL078605.1-201ENST00000603529 500 ntBASIC2.21□□□□□ -2.06
NGFP01138 AL080274.1-201ENST00000605565 220 ntBASIC2.21□□□□□ -2.06
NGFP01138 RPL23AP88-201ENST00000605759 454 ntBASIC2.21□□□□□ -2.06
NGFP01138 HMGB1P24-202ENST00000615653 685 ntBASIC2.21□□□□□ -2.06
NGFP01138 AC092608.2-201ENST00000624427 218 ntBASIC2.21□□□□□ -2.06
NGFP01138 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NGFP01138 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NGFP01138 RNU6-655P-201ENST00000362858 107 ntBASIC2.2□□□□□ -2.06
NGFP01138 RNU1-72P-201ENST00000362976 153 ntBASIC2.2□□□□□ -2.06
NGFP01138 Y_RNA.197-201ENST00000364004 102 ntBASIC2.2□□□□□ -2.06
NGFP01138 Y_RNA.394-201ENST00000383942 103 ntBASIC2.2□□□□□ -2.06
NGFP01138 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.2□□□□□ -2.06
NGFP01138 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.2□□□□□ -2.06
NGFP01138 MTND1P14-201ENST00000427400 950 ntBASIC2.2□□□□□ -2.06
NGFP01138 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.2□□□□□ -2.06
NGFP01138 RPS15AP7-201ENST00000439294 405 ntBASIC2.2□□□□□ -2.06
NGFP01138 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.2□□□□□ -2.06
NGFP01138 AC080013.2-201ENST00000460866 323 ntBASIC2.2□□□□□ -2.06
NGFP01138 AC027575.1-201ENST00000481064 460 ntBASIC2.2□□□□□ -2.06
NGFP01138 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.2□□□□□ -2.06
NGFP01138 RPL23AP75-201ENST00000491601 451 ntBASIC2.2□□□□□ -2.06
NGFP01138 HMGB1P35-201ENST00000503360 598 ntBASIC2.2□□□□□ -2.06
NGFP01138 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.2□□□□□ -2.06
NGFP01138 SCARNA3-201ENST00000517097 143 ntBASIC2.2□□□□□ -2.06
NGFP01138 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.2□□□□□ -2.06
NGFP01138 MRPS36P4-201ENST00000534436 298 ntBASIC2.2□□□□□ -2.06
NGFP01138 AC027176.1-201ENST00000560204 514 ntBASIC2.2□□□□□ -2.06
NGFP01138 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.2□□□□□ -2.06
NGFP01138 AC080078.3-201ENST00000605407 463 ntBASIC2.2□□□□□ -2.06
NGFP01138 SCARNA4-201ENST00000629045 128 ntBASIC2.2□□□□□ -2.06
NGFP01138 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.2□□□□□ -2.06
NGFP01138 AC233981.2-201ENST00000611524 1614 ntBASIC2.2□□□□□ -2.06
NGFP01138 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.2□□□□□ -2.06
NGFP01138 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.2□□□□□ -2.06
NGFP01138 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NGFP01138 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NGFP01138 RNU6-490P-201ENST00000362985 107 ntBASIC2.19□□□□□ -2.06
NGFP01138 RNY1P16-201ENST00000363063 111 ntBASIC2.19□□□□□ -2.06
NGFP01138 Y_RNA.112-201ENST00000363250 102 ntBASIC2.19□□□□□ -2.06
NGFP01138 RNU4-9P-201ENST00000364951 139 ntBASIC2.19□□□□□ -2.06
NGFP01138 RNU6-968P-201ENST00000384076 107 ntBASIC2.19□□□□□ -2.06
NGFP01138 Y_RNA.504-201ENST00000384481 104 ntBASIC2.19□□□□□ -2.06
NGFP01138 RNU2-25P-201ENST00000411041 191 ntBASIC2.19□□□□□ -2.06
NGFP01138 AL354751.2-201ENST00000415471 210 ntBASIC2.19□□□□□ -2.06
NGFP01138 AL358453.1-201ENST00000422522 250 ntBASIC2.19□□□□□ -2.06
NGFP01138 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.19□□□□□ -2.06
NGFP01138 RPL30P4-201ENST00000429309 333 ntBASIC2.19□□□□□ -2.06
NGFP01138 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.19□□□□□ -2.06
NGFP01138 RPL39P40-201ENST00000445481 146 ntBASIC2.19□□□□□ -2.06
NGFP01138 AL513328.1-201ENST00000446460 224 ntBASIC2.19□□□□□ -2.06
NGFP01138 RPS3P1-201ENST00000456781 192 ntBASIC2.19□□□□□ -2.06
NGFP01138 RN7SKP210-201ENST00000459176 261 ntBASIC2.19□□□□□ -2.06
NGFP01138 RPL17P19-201ENST00000489069 552 ntBASIC2.19□□□□□ -2.06
NGFP01138 RNU2-53P-201ENST00000516257 147 ntBASIC2.19□□□□□ -2.06
NGFP01138 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.19□□□□□ -2.06
NGFP01138 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.19□□□□□ -2.06
NGFP01138 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.19□□□□□ -2.06
NGFP01138 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.19□□□□□ -2.06
NGFP01138 AC007375.1-201ENST00000554513 578 ntBASIC2.19□□□□□ -2.06
NGFP01138 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.19□□□□□ -2.06
NGFP01138 AC104581.2-201ENST00000572227 430 ntBASIC2.19□□□□□ -2.06
NGFP01138 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.19□□□□□ -2.06
NGFP01138 AL359198.2-201ENST00000611836 194 ntBASIC2.19□□□□□ -2.06
NGFP01138 AC005520.5-201ENST00000613926 164 ntBASIC2.19□□□□□ -2.06
NGFP01138 MIR6715A-201ENST00000615929 79 ntBASIC2.19□□□□□ -2.06
NGFP01138 AC091925.1-201ENST00000623204 462 ntBASIC2.19□□□□□ -2.06
NGFP01138 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.19□□□□□ -2.06
NGFP01138 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
NGFP01138 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms