Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RPL31P41-201ENST00000477967 372 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 MRPS36P2-201ENST00000512569 299 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN1O95832 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN1O95832 GLYCAM1-201ENST00000546596 285 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 AC079598.5-201ENST00000547460 117 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN1O95832 AL355596.1-201ENST00000565399 3996 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.21□□□□□ -2.06
CLDN1O95832 MIR4635-201ENST00000583759 79 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.21□□□□□ -2.06
CLDN1O95832 AL109809.4-201ENST00000603520 2185 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 AL669831.3-213ENST00000636676 183 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.21□□□□□ -2.06
CLDN1O95832 AC002543.1-201ENST00000299783 1954 ntBASIC2.21□□□□□ -2.06
CLDN1O95832 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CLDN1O95832 AC006026.1-201ENST00000444025 1803 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CLDN1O95832 RNU6-1285P-201ENST00000363480 105 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNU6-1059P-201ENST00000363752 98 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNU6-1141P-201ENST00000364520 107 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 Y_RNA.813-201ENST00000364639 102 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 DEFA7P-201ENST00000382676 285 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNU6-1083P-201ENST00000384022 107 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNU6-784P-201ENST00000384330 106 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNU6-1222P-201ENST00000384615 107 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 SNORA26.3-201ENST00000391119 136 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNU6-1050P-201ENST00000410388 107 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNU2-23P-201ENST00000410545 195 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RN7SKP61-201ENST00000410642 295 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 EIF4EP2-201ENST00000422816 654 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 MICF-203ENST00000432679 129 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 AC236972.2-201ENST00000434979 310 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN1O95832 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN1O95832 AL031659.1-201ENST00000447075 539 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 AC079354.2-201ENST00000453523 154 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN1O95832 AL441985.1-201ENST00000457727 251 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 AP001324.2-201ENST00000461163 319 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN1O95832 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.2□□□□□ -2.06
CLDN1O95832 SCARNA17.1-201ENST00000516211 143 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 SCARNA17.2-201ENST00000516334 143 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNA5SP281-201ENST00000516504 135 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.2□□□□□ -2.06
CLDN1O95832 AC109329.1-201ENST00000518744 317 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.2□□□□□ -2.06
CLDN1O95832 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.2□□□□□ -2.06
CLDN1O95832 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.2□□□□□ -2.06
CLDN1O95832 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.2□□□□□ -2.06
CLDN1O95832 AL356575.1-201ENST00000603008 283 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 AL133255.1-201ENST00000606374 441 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 MIR3976-201ENST00000606807 139 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 AC009229.3-201ENST00000608056 282 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 SCARNA17.4-201ENST00000614296 143 ntBASIC2.2□□□□□ -2.06
CLDN1O95832 AP000560.1-201ENST00000624150 1937 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 SNORD50.1-201ENST00000362987 71 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 SNORA68.1-201ENST00000364537 132 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 Y_RNA.259-201ENST00000364619 101 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 Y_RNA.404-201ENST00000383978 102 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 RNU1-138P-201ENST00000384093 164 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 RNU6-43P-201ENST00000384302 107 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 RNU6-790P-201ENST00000384479 105 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 SNORA75.4-201ENST00000391278 119 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 MIR1287-201ENST00000408492 90 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 RNU6-1245P-201ENST00000411130 106 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 RPS15AP7-201ENST00000439294 405 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 RPS12P2-201ENST00000439728 269 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN1O95832 AC016256.1-201ENST00000547971 354 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AC109446.1-201ENST00000566172 220 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.19□□□□□ -2.06
CLDN1O95832 AL049779.4-201ENST00000604500 156 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AC096772.1-201ENST00000609146 564 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AC009318.2-201ENST00000610917 651 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AL160413.1-201ENST00000622780 310 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.19□□□□□ -2.06
CLDN1O95832 SNORA43.4-201ENST00000629559 138 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 MTND4LP32-201ENST00000636111 270 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 MTND4P29-201ENST00000503122 1372 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AC010329.5-201ENST00000623497 2174 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AC073544.1-201ENST00000600110 1595 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 AC135776.4-201ENST00000624300 1904 ntBASIC2.19□□□□□ -2.06
CLDN1O95832 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.18□□□□□ -2.06
CLDN1O95832 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.18□□□□□ -2.06
CLDN1O95832 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
CLDN1O95832 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN1O95832 Y_RNA.315-201ENST00000365117 102 ntBASIC2.18□□□□□ -2.06
CLDN1O95832 Y_RNA.431-201ENST00000384086 102 ntBASIC2.18□□□□□ -2.06
CLDN1O95832 Y_RNA.460-201ENST00000384255 102 ntBASIC2.18□□□□□ -2.06
CLDN1O95832 RNU6-310P-201ENST00000384655 107 ntBASIC2.18□□□□□ -2.06
CLDN1O95832 RNA5SP210-201ENST00000391034 120 ntBASIC2.18□□□□□ -2.06
CLDN1O95832 AL359511.1-201ENST00000402970 211 ntBASIC2.18□□□□□ -2.06
CLDN1O95832 Y_RNA.646-201ENST00000410980 101 ntBASIC2.18□□□□□ -2.06
CLDN1O95832 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN1O95832 MTCO2P27-201ENST00000420740 428 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms