Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 RNU6-611P-201ENST00000384276 104 ntBASIC2.49□□□□□ -2.01
RTN3O95197 RNU6-831P-201ENST00000384548 107 ntBASIC2.49□□□□□ -2.01
RTN3O95197 RNA5SP201-201ENST00000410316 124 ntBASIC2.49□□□□□ -2.01
RTN3O95197 RNU2-48P-201ENST00000410694 191 ntBASIC2.49□□□□□ -2.01
RTN3O95197 RNA5SP270-201ENST00000411361 118 ntBASIC2.49□□□□□ -2.01
RTN3O95197 AL590632.1-201ENST00000424289 371 ntBASIC2.49□□□□□ -2.01
RTN3O95197 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.49□□□□□ -2.01
RTN3O95197 MTND4LP16-201ENST00000440828 295 ntBASIC2.49□□□□□ -2.01
RTN3O95197 AC130509.1-201ENST00000464158 433 ntBASIC2.49□□□□□ -2.01
RTN3O95197 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.49□□□□□ -2.01
RTN3O95197 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.49□□□□□ -2.01
RTN3O95197 RNU6-358P-201ENST00000516564 75 ntBASIC2.49□□□□□ -2.01
RTN3O95197 CYP4A27P-201ENST00000567218 190 ntBASIC2.49□□□□□ -2.01
RTN3O95197 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.49□□□□□ -2.01
RTN3O95197 MIR4524B-201ENST00000581569 115 ntBASIC2.49□□□□□ -2.01
RTN3O95197 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.49□□□□□ -2.01
RTN3O95197 AC046143.2-201ENST00000609789 160 ntBASIC2.49□□□□□ -2.01
RTN3O95197 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
RTN3O95197 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
RTN3O95197 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RTN3O95197 MTND4P5-201ENST00000435821 1374 ntBASIC2.49□□□□□ -2.01
RTN3O95197 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN3O95197 Y_RNA.123-201ENST00000363338 102 ntBASIC2.48□□□□□ -2.01
RTN3O95197 SNORD32B-201ENST00000364460 84 ntBASIC2.48□□□□□ -2.01
RTN3O95197 RNU6-790P-201ENST00000384479 105 ntBASIC2.48□□□□□ -2.01
RTN3O95197 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTN3O95197 MIR1294-201ENST00000408503 142 ntBASIC2.48□□□□□ -2.01
RTN3O95197 AL135786.1-201ENST00000415892 214 ntBASIC2.48□□□□□ -2.01
RTN3O95197 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN3O95197 PCMTD1P1-201ENST00000455560 355 ntBASIC2.48□□□□□ -2.01
RTN3O95197 MTND1P11-201ENST00000456661 876 ntBASIC2.48□□□□□ -2.01
RTN3O95197 AC069439.1-201ENST00000494739 167 ntBASIC2.48□□□□□ -2.01
RTN3O95197 RNU6-965P-201ENST00000516721 96 ntBASIC2.48□□□□□ -2.01
RTN3O95197 RNA5SP137-201ENST00000516833 135 ntBASIC2.48□□□□□ -2.01
RTN3O95197 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN3O95197 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RTN3O95197 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.48□□□□□ -2.01
RTN3O95197 AC009127.3-201ENST00000570531 403 ntBASIC2.48□□□□□ -2.01
RTN3O95197 AC026271.5-201ENST00000577873 130 ntBASIC2.48□□□□□ -2.01
RTN3O95197 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.48□□□□□ -2.01
RTN3O95197 SNRPGP17-201ENST00000603780 214 ntBASIC2.48□□□□□ -2.01
RTN3O95197 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.48□□□□□ -2.01
RTN3O95197 AL161423.1-201ENST00000613700 262 ntBASIC2.48□□□□□ -2.01
RTN3O95197 AL132822.1-201ENST00000617063 513 ntBASIC2.48□□□□□ -2.01
RTN3O95197 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RTN3O95197 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.47□□□□□ -2.01
RTN3O95197 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RTN3O95197 ZNF720P1-201ENST00000562403 1939 ntBASIC2.47□□□□□ -2.01
RTN3O95197 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.47□□□□□ -2.01
RTN3O95197 Y_RNA.151-201ENST00000363566 112 ntBASIC2.47□□□□□ -2.01
RTN3O95197 Y_RNA.248-201ENST00000364501 109 ntBASIC2.47□□□□□ -2.01
RTN3O95197 SNORA36A-201ENST00000384221 132 ntBASIC2.47□□□□□ -2.01
RTN3O95197 SNORA12-201ENST00000391162 147 ntBASIC2.47□□□□□ -2.01
RTN3O95197 RNU6-510P-201ENST00000391239 108 ntBASIC2.47□□□□□ -2.01
RTN3O95197 AC012306.1-201ENST00000423267 114 ntBASIC2.47□□□□□ -2.01
RTN3O95197 HMGN2P38-201ENST00000423806 265 ntBASIC2.47□□□□□ -2.01
RTN3O95197 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.47□□□□□ -2.01
RTN3O95197 DAP3P1-201ENST00000441522 278 ntBASIC2.47□□□□□ -2.01
RTN3O95197 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.47□□□□□ -2.01
RTN3O95197 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.47□□□□□ -2.01
RTN3O95197 AC132942.1-201ENST00000486753 483 ntBASIC2.47□□□□□ -2.01
RTN3O95197 PTP4A1P4-201ENST00000512479 322 ntBASIC2.47□□□□□ -2.01
RTN3O95197 RNU6-273P-201ENST00000516937 96 ntBASIC2.47□□□□□ -2.01
RTN3O95197 AC107953.1-201ENST00000522216 297 ntBASIC2.47□□□□□ -2.01
RTN3O95197 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.47□□□□□ -2.01
RTN3O95197 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.47□□□□□ -2.01
RTN3O95197 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.47□□□□□ -2.01
RTN3O95197 FGF7P1-201ENST00000582820 288 ntBASIC2.47□□□□□ -2.01
RTN3O95197 PCGEM1.1-201ENST00000613431 131 ntBASIC2.47□□□□□ -2.01
RTN3O95197 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.46□□□□□ -2.01
RTN3O95197 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
RTN3O95197 U3.9-201ENST00000363823 204 ntBASIC2.46□□□□□ -2.02
RTN3O95197 RNU6-1286P-201ENST00000383871 107 ntBASIC2.46□□□□□ -2.02
RTN3O95197 RNU6-784P-201ENST00000384330 106 ntBASIC2.46□□□□□ -2.02
RTN3O95197 MIR504-201ENST00000385065 83 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.46□□□□□ -2.02
RTN3O95197 AL356320.1-201ENST00000429616 163 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AL137159.1-201ENST00000452808 512 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.46□□□□□ -2.02
RTN3O95197 snoU13.26-201ENST00000459452 105 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AC090255.1-201ENST00000495779 349 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AC021146.2-201ENST00000504736 556 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AC008549.1-201ENST00000512900 643 ntBASIC2.46□□□□□ -2.02
RTN3O95197 RNU4-49P-201ENST00000516080 140 ntBASIC2.46□□□□□ -2.02
RTN3O95197 RNA5SP281-201ENST00000516504 135 ntBASIC2.46□□□□□ -2.02
RTN3O95197 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.46□□□□□ -2.02
RTN3O95197 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.46□□□□□ -2.02
RTN3O95197 MIR5007-201ENST00000583098 95 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AL031274.2-201ENST00000599419 203 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AP000654.2-201ENST00000605633 586 ntBASIC2.46□□□□□ -2.02
RTN3O95197 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RTN3O95197 MIR3976-201ENST00000606807 139 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AC005520.5-201ENST00000613926 164 ntBASIC2.46□□□□□ -2.02
RTN3O95197 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.46□□□□□ -2.02
RTN3O95197 AC009248.2-201ENST00000619826 254 ntBASIC2.46□□□□□ -2.02
RTN3O95197 RNU6-968P-201ENST00000384076 107 ntBASIC2.45□□□□□ -2.02
RTN3O95197 MIR517A-201ENST00000385001 87 ntBASIC2.45□□□□□ -2.02
RTN3O95197 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RTN3O95197 RPL30P16-201ENST00000419341 429 ntBASIC2.45□□□□□ -2.02
RTN3O95197 AL353572.1-201ENST00000442490 417 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms