Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RNU6-595P-201ENST00000363944 107 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 RNU4-56P-201ENST00000364700 142 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 Y_RNA.315-201ENST00000365117 102 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 SNORA70B-201ENST00000384210 135 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 Y_RNA.460-201ENST00000384255 102 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 SNORA75.6-201ENST00000391318 127 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 SNORD88.1-201ENST00000408684 91 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 AC009963.1-201ENST00000417265 157 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 AF228730.4-201ENST00000421457 183 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 AC011816.1-201ENST00000441346 546 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 AL353705.4-201ENST00000449661 238 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 SNORA31.16-201ENST00000516773 139 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 SNORD53-201ENST00000579969 78 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 AC105245.1-201ENST00000581934 244 ntBASIC3.1□□□□□ -1.91
CTNND1O60716 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNND1O60716 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNND1O60716 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTNND1O60716 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CTNND1O60716 RNU6-1180P-201ENST00000364935 107 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 MIR181A2-201ENST00000384863 110 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 RPS20P15-201ENST00000412792 311 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AL451074.5-201ENST00000415894 435 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AC243428.1-201ENST00000421099 264 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNND1O60716 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNND1O60716 AL121890.1-201ENST00000435457 205 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNND1O60716 UBBP3-201ENST00000445497 241 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 RPL23AP75-201ENST00000491601 451 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 HMGN1P13-201ENST00000505795 138 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNND1O60716 RNU6-567P-201ENST00000516746 107 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AC109329.2-201ENST00000519658 482 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.09□□□□□ -1.91
CTNND1O60716 7SK.7-201ENST00000603504 247 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AL078605.1-201ENST00000603529 500 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AL356280.1-201ENST00000603614 379 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AL034555.1-201ENST00000604816 211 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AC107871.2-201ENST00000612894 502 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 AC064859.1-201ENST00000624741 174 ntBASIC3.09□□□□□ -1.91
CTNND1O60716 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTNND1O60716 MTND5P10-201ENST00000603719 1809 ntBASIC3.09□□□□□ -1.92
CTNND1O60716 RNU5B-2P-201ENST00000363036 113 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 Y_RNA.146-201ENST00000363549 102 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 Y_RNA.419-201ENST00000384041 102 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 RNU6-890P-201ENST00000384121 107 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 SNORA36A-201ENST00000384221 132 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.08□□□□□ -1.92
CTNND1O60716 AC012306.1-201ENST00000423267 114 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 RPS29P6-201ENST00000438196 145 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.08□□□□□ -1.92
CTNND1O60716 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.08□□□□□ -1.92
CTNND1O60716 AC093303.1-201ENST00000514549 295 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 SNORA9.3-201ENST00000516383 129 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 RNA5SP24-201ENST00000516478 95 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.08□□□□□ -1.92
CTNND1O60716 MIR3923-201ENST00000579521 83 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.08□□□□□ -1.92
CTNND1O60716 AC078899.3-201ENST00000599065 212 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 AC005014.2-201ENST00000607795 599 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.08□□□□□ -1.92
CTNND1O60716 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTNND1O60716 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
CTNND1O60716 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.07□□□□□ -1.92
CTNND1O60716 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.07□□□□□ -1.92
CTNND1O60716 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CTNND1O60716 RNU1-72P-201ENST00000362976 153 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 RNU4-9P-201ENST00000364951 139 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 FO393413.1-201ENST00000402892 195 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 AL590004.2-201ENST00000404787 371 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 RNA5SP494-201ENST00000410653 129 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 AL445687.1-201ENST00000439946 251 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.07□□□□□ -1.92
CTNND1O60716 GSTA11P-201ENST00000452866 669 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 AL353752.1-201ENST00000454946 260 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 RN7SKP210-201ENST00000459176 261 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 RN7SL499P-201ENST00000481141 276 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 AC068781.1-201ENST00000488231 618 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 AC021146.2-201ENST00000504736 556 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 RNU6-264P-201ENST00000517134 104 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.07□□□□□ -1.92
CTNND1O60716 AC023043.3-201ENST00000593113 385 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 CYP2C61P-201ENST00000604072 290 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 Z98751.3-201ENST00000604447 521 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 AL670379.2-201ENST00000604983 252 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 RPL23AP88-201ENST00000605759 454 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 MIR5739-201ENST00000619803 80 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 MAPK10-266ENST00000641066 6555 ntBASIC3.07□□□□□ -1.92
CTNND1O60716 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CTNND1O60716 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTNND1O60716 snoU2_19.1-201ENST00000362361 80 ntBASIC3.06□□□□□ -1.92
CTNND1O60716 RNY1P16-201ENST00000363063 111 ntBASIC3.06□□□□□ -1.92
CTNND1O60716 MIR27B-201ENST00000385129 97 ntBASIC3.06□□□□□ -1.92
CTNND1O60716 RNU6-220P-201ENST00000390919 107 ntBASIC3.06□□□□□ -1.92
CTNND1O60716 Y_RNA.579-201ENST00000390939 94 ntBASIC3.06□□□□□ -1.92
CTNND1O60716 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms