Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AL031775.1-201ENST00000607014 887 ntBASIC0.61□□□□□ -2.31
SSNA1O43805 Y_RNA.18-201ENST00000362461 102 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 RNA5SP109-201ENST00000391010 116 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 RPL21P1-201ENST00000399532 476 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 MIR208B-201ENST00000401172 77 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 RNU6-387P-201ENST00000411331 105 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 RPS3AP1-201ENST00000413190 320 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 RPS26P5-201ENST00000418544 335 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
SSNA1O43805 AC073614.1-201ENST00000438690 650 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.6□□□□□ -2.31
SSNA1O43805 AC013470.1-201ENST00000453438 462 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.6□□□□□ -2.31
SSNA1O43805 ARL2BPP4-201ENST00000506854 471 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 RNU6-467P-201ENST00000517027 110 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 AC109479.2-201ENST00000517842 174 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 AL590705.4-201ENST00000532209 134 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.6□□□□□ -2.31
SSNA1O43805 MIR4698-201ENST00000577795 80 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 AC009977.1-201ENST00000586015 570 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 AC105148.1-201ENST00000604961 409 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 AL121992.2-201ENST00000606262 256 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 AC107308.1-201ENST00000615897 301 ntBASIC0.6□□□□□ -2.31
SSNA1O43805 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
SSNA1O43805 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
SSNA1O43805 snoU2-30.2-201ENST00000362805 70 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 RNU6-457P-201ENST00000363999 107 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 Y_RNA.504-201ENST00000384481 104 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
SSNA1O43805 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.59□□□□□ -2.31
SSNA1O43805 AC010154.1-201ENST00000425857 269 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 MTATP6P16-201ENST00000434543 526 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 AC002486.1-201ENST00000435098 391 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 HMGN2P34-201ENST00000437647 269 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.59□□□□□ -2.31
SSNA1O43805 Z73417.1-201ENST00000447373 778 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 EXOSC3P1-201ENST00000448649 500 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.59□□□□□ -2.31
SSNA1O43805 AC016632.1-201ENST00000503994 196 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 AC112206.4-201ENST00000515142 405 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 SNORD79.1-201ENST00000516069 84 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 RNU6-922P-201ENST00000516753 99 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 RNU6-1220P-201ENST00000517126 108 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.59□□□□□ -2.31
SSNA1O43805 DEFB131C-201ENST00000528817 165 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 AC025423.5-201ENST00000550230 219 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.59□□□□□ -2.31
SSNA1O43805 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.59□□□□□ -2.31
SSNA1O43805 AL031667.3-201ENST00000620124 655 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 AC091895.1-201ENST00000624494 256 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 AL445984.1-201ENST00000637834 659 ntBASIC0.59□□□□□ -2.31
SSNA1O43805 RNA5SP361-201ENST00000362686 118 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 Y_RNA.363-201ENST00000365529 113 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 SNORA18.2-201ENST00000383865 132 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 U8.10-201ENST00000384260 133 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 SNORD12-201ENST00000391002 90 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 RPS29P13-201ENST00000402041 169 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
SSNA1O43805 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.58□□□□□ -2.32
SSNA1O43805 AL606517.2-201ENST00000442855 241 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 SNRPFP4-201ENST00000456366 242 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 RAP1BP2-201ENST00000478270 544 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 AF131216.2-201ENST00000512316 564 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.58□□□□□ -2.32
SSNA1O43805 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.58□□□□□ -2.32
SSNA1O43805 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.58□□□□□ -2.32
SSNA1O43805 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.58□□□□□ -2.32
SSNA1O43805 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.58□□□□□ -2.32
SSNA1O43805 VN1R107P-201ENST00000601784 209 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 AL356157.2-201ENST00000605122 111 ntBASIC0.58□□□□□ -2.32
SSNA1O43805 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.58□□□□□ -2.32
SSNA1O43805 RNU6-83P-201ENST00000384568 112 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 MIR200A-201ENST00000384875 90 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 MRPL42P2-201ENST00000403169 426 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 MIR1283-1-201ENST00000408494 87 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 RNU6-1054P-201ENST00000411293 104 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 AP1B1P2-201ENST00000416196 106 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.57□□□□□ -2.32
SSNA1O43805 AC245047.7-201ENST00000440265 293 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.57□□□□□ -2.32
SSNA1O43805 AL031313.1-201ENST00000448435 256 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.57□□□□□ -2.32
SSNA1O43805 RNU7-95P-201ENST00000459222 64 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 AC034244.1-201ENST00000507687 207 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 RNU2-34P-201ENST00000516534 121 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 RNU6-567P-201ENST00000516746 107 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.57□□□□□ -2.32
SSNA1O43805 AC091489.2-201ENST00000566263 604 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 AC005520.5-201ENST00000613926 164 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
SSNA1O43805 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SSNA1O43805 AC023934.1-201ENST00000574529 2389 ntBASIC0.56□□□□□ -2.32
SSNA1O43805 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SSNA1O43805 SNORD115-7-201ENST00000365306 82 ntBASIC0.56□□□□□ -2.32
SSNA1O43805 RNU6-505P-201ENST00000384427 107 ntBASIC0.56□□□□□ -2.32
SSNA1O43805 RNU6-1031P-201ENST00000384773 107 ntBASIC0.56□□□□□ -2.32
SSNA1O43805 AF228730.1-201ENST00000397972 663 ntBASIC0.56□□□□□ -2.32
SSNA1O43805 MIR942-201ENST00000401111 86 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms