Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC138749.5-201ENST00000611461 208 ntBASIC0.88□□□□□ -2.27
SGCEO43556 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC116165.2-201ENST00000616705 206 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AC027335.2-201ENST00000624030 375 ntBASIC0.88□□□□□ -2.27
SGCEO43556 AL391516.1-201ENST00000554380 2449 ntBASIC0.88□□□□□ -2.27
SGCEO43556 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
SGCEO43556 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
SGCEO43556 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
SGCEO43556 SNORD32A-201ENST00000364805 84 ntBASIC0.87□□□□□ -2.27
SGCEO43556 SNORD115-7-201ENST00000365306 82 ntBASIC0.87□□□□□ -2.27
SGCEO43556 AL117342.1-201ENST00000404861 406 ntBASIC0.87□□□□□ -2.27
SGCEO43556 AL365184.2-201ENST00000431139 435 ntBASIC0.87□□□□□ -2.27
SGCEO43556 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.87□□□□□ -2.27
SGCEO43556 AC073910.1-201ENST00000445047 438 ntBASIC0.87□□□□□ -2.27
SGCEO43556 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.87□□□□□ -2.27
SGCEO43556 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.87□□□□□ -2.27
SGCEO43556 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.87□□□□□ -2.27
SGCEO43556 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.87□□□□□ -2.27
SGCEO43556 AC013470.1-201ENST00000453438 462 ntBASIC0.87□□□□□ -2.27
SGCEO43556 COX6CP14-201ENST00000469580 174 ntBASIC0.87□□□□□ -2.27
SGCEO43556 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.87□□□□□ -2.27
SGCEO43556 RNU6-856P-201ENST00000516959 98 ntBASIC0.87□□□□□ -2.27
SGCEO43556 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.87□□□□□ -2.27
SGCEO43556 AC021231.3-201ENST00000558497 370 ntBASIC0.87□□□□□ -2.27
SGCEO43556 CYP4A27P-201ENST00000567218 190 ntBASIC0.87□□□□□ -2.27
SGCEO43556 AC136932.1-201ENST00000574771 208 ntBASIC0.87□□□□□ -2.27
SGCEO43556 AC080078.3-201ENST00000605407 463 ntBASIC0.87□□□□□ -2.27
SGCEO43556 AL022345.2-201ENST00000606307 135 ntBASIC0.87□□□□□ -2.27
SGCEO43556 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
SGCEO43556 AC008147.4-201ENST00000617570 1204 ntBASIC0.87□□□□□ -2.27
SGCEO43556 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.87□□□□□ -2.27
SGCEO43556 AC006927.3-201ENST00000638789 384 ntBASIC0.87□□□□□ -2.27
SGCEO43556 MTND5P17-201ENST00000418405 1603 ntBASIC0.86□□□□□ -2.27
SGCEO43556 RNU5F-6P-201ENST00000362979 116 ntBASIC0.86□□□□□ -2.27
SGCEO43556 RNU6-392P-201ENST00000364926 101 ntBASIC0.86□□□□□ -2.27
SGCEO43556 SNORA72.2-201ENST00000365028 127 ntBASIC0.86□□□□□ -2.27
SGCEO43556 RNU6-378P-201ENST00000384324 107 ntBASIC0.86□□□□□ -2.27
SGCEO43556 RPS29P13-201ENST00000402041 169 ntBASIC0.86□□□□□ -2.27
SGCEO43556 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.86□□□□□ -2.27
SGCEO43556 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.86□□□□□ -2.27
SGCEO43556 MTATP6P16-201ENST00000434543 526 ntBASIC0.86□□□□□ -2.27
SGCEO43556 Z73417.1-201ENST00000447373 778 ntBASIC0.86□□□□□ -2.27
SGCEO43556 HSPE1P13-201ENST00000451143 297 ntBASIC0.86□□□□□ -2.27
SGCEO43556 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.86□□□□□ -2.27
SGCEO43556 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.86□□□□□ -2.27
SGCEO43556 Y_RNA.672-201ENST00000516289 104 ntBASIC0.86□□□□□ -2.27
SGCEO43556 AC022616.3-201ENST00000523940 148 ntBASIC0.86□□□□□ -2.27
SGCEO43556 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.86□□□□□ -2.27
SGCEO43556 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.86□□□□□ -2.27
SGCEO43556 MIR4661-201ENST00000582720 75 ntBASIC0.86□□□□□ -2.27
SGCEO43556 AL353149.1-201ENST00000610667 244 ntBASIC0.86□□□□□ -2.27
SGCEO43556 AP002371.2-201ENST00000624450 503 ntBASIC0.86□□□□□ -2.27
SGCEO43556 U6.114-201ENST00000636407 96 ntBASIC0.86□□□□□ -2.27
SGCEO43556 RNU6-552P-201ENST00000362869 119 ntBASIC0.85□□□□□ -2.27
SGCEO43556 RNU6-877P-201ENST00000383868 107 ntBASIC0.85□□□□□ -2.27
SGCEO43556 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.85□□□□□ -2.27
SGCEO43556 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.85□□□□□ -2.27
SGCEO43556 RPL23AP95-201ENST00000426806 265 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AL603825.1-201ENST00000438481 80 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AC079140.5-201ENST00000507882 310 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.85□□□□□ -2.27
SGCEO43556 AC067942.3-201ENST00000512025 362 ntBASIC0.85□□□□□ -2.27
SGCEO43556 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SGCEO43556 RNU2-34P-201ENST00000516534 121 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AL442163.3-201ENST00000554110 156 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AC090517.1-201ENST00000569307 266 ntBASIC0.85□□□□□ -2.27
SGCEO43556 TMF1P1-201ENST00000576058 373 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AC078795.3-201ENST00000602913 472 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AC091805.2-201ENST00000603848 235 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AL121992.2-201ENST00000606262 256 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AC064807.4-201ENST00000607201 407 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AC136475.10-201ENST00000620253 385 ntBASIC0.85□□□□□ -2.27
SGCEO43556 AL136221.1-201ENST00000621449 509 ntBASIC0.85□□□□□ -2.27
SGCEO43556 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
SGCEO43556 RNU6-1123P-201ENST00000362347 106 ntBASIC0.84□□□□□ -2.27
SGCEO43556 RNU6-428P-201ENST00000362942 107 ntBASIC0.84□□□□□ -2.27
SGCEO43556 RNA5SP259-201ENST00000365541 109 ntBASIC0.84□□□□□ -2.27
SGCEO43556 SNORA20.2-201ENST00000383922 131 ntBASIC0.84□□□□□ -2.27
SGCEO43556 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SGCEO43556 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.84□□□□□ -2.27
SGCEO43556 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.84□□□□□ -2.27
SGCEO43556 AL163973.1-201ENST00000484753 577 ntBASIC0.84□□□□□ -2.27
SGCEO43556 AC011406.1-201ENST00000512440 370 ntBASIC0.84□□□□□ -2.27
SGCEO43556 TRMT112P2-201ENST00000512910 132 ntBASIC0.84□□□□□ -2.27
SGCEO43556 RNA5SP384-201ENST00000516615 116 ntBASIC0.84□□□□□ -2.27
SGCEO43556 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.84□□□□□ -2.27
SGCEO43556 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.84□□□□□ -2.27
SGCEO43556 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
SGCEO43556 AC005520.5-201ENST00000613926 164 ntBASIC0.84□□□□□ -2.27
SGCEO43556 AC008250.2-201ENST00000615261 205 ntBASIC0.84□□□□□ -2.27
SGCEO43556 AC126177.8-201ENST00000618339 1015 ntBASIC0.84□□□□□ -2.27
SGCEO43556 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.84□□□□□ -2.27
SGCEO43556 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.84□□□□□ -2.28
SGCEO43556 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SGCEO43556 RNU6-1287P-201ENST00000362914 107 ntBASIC0.83□□□□□ -2.28
SGCEO43556 Y_RNA.338-201ENST00000365320 114 ntBASIC0.83□□□□□ -2.28
SGCEO43556 RNU6-1060P-201ENST00000384664 107 ntBASIC0.83□□□□□ -2.28
SGCEO43556 MIR300-201ENST00000401138 83 ntBASIC0.83□□□□□ -2.28
SGCEO43556 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.83□□□□□ -2.28
SGCEO43556 USP9YP14-201ENST00000430663 563 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms