Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SRGAP3O43295 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.72□□□□□ -1.81
SRGAP3O43295 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.72□□□□□ -1.81
SRGAP3O43295 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SRGAP3O43295 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
SRGAP3O43295 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SRGAP3O43295 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.72□□□□□ -1.81
SRGAP3O43295 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SRGAP3O43295 SNORD63-201ENST00000384262 68 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 SNORD116-20-201ENST00000384529 92 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 RNU6-21P-201ENST00000384710 107 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 RNU6-1197P-201ENST00000391183 107 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 RNU6-493P-201ENST00000391321 108 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 RNA5SP274-201ENST00000410484 108 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.71□□□□□ -1.82
SRGAP3O43295 SEPT14P8-201ENST00000508026 178 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.71□□□□□ -1.82
SRGAP3O43295 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.71□□□□□ -1.82
SRGAP3O43295 RNU6-1114P-201ENST00000516022 107 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 RNU6-703P-201ENST00000516946 107 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 MIR5695-201ENST00000579717 85 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 AC010620.2-201ENST00000600135 313 ntBASIC3.71□□□□□ -1.82
SRGAP3O43295 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.71□□□□□ -1.82
SRGAP3O43295 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.71□□□□□ -1.82
SRGAP3O43295 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.71□□□□□ -1.82
SRGAP3O43295 AC090740.1-201ENST00000623193 2262 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.7□□□□□ -1.82
SRGAP3O43295 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SRGAP3O43295 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SRGAP3O43295 AC118273.1-201ENST00000525324 3006 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 SNORD56.1-201ENST00000362913 68 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 Y_RNA.286-201ENST00000364813 102 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 RNU6-662P-201ENST00000384253 104 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 Y_RNA.464-201ENST00000384282 110 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 RNU1-139P-201ENST00000391307 165 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 HMGN2P30-201ENST00000423237 256 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.7□□□□□ -1.82
SRGAP3O43295 RPL37P4-201ENST00000448908 268 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 RNU7-120P-201ENST00000459334 63 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 RNU7-110P-201ENST00000516891 62 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 RNU6-255P-201ENST00000516957 105 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.7□□□□□ -1.82
SRGAP3O43295 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.7□□□□□ -1.82
SRGAP3O43295 MIR3910-1-201ENST00000580936 111 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 SNORD113-5-201ENST00000607261 78 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 AC024581.2-201ENST00000619986 252 ntBASIC3.7□□□□□ -1.82
SRGAP3O43295 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.7□□□□□ -1.82
SRGAP3O43295 AL136964.1-201ENST00000622038 2990 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.69□□□□□ -1.82
SRGAP3O43295 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SRGAP3O43295 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.69□□□□□ -1.82
SRGAP3O43295 RNU6-600P-201ENST00000362524 99 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 SNORA29-201ENST00000384183 140 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 SNORA44-201ENST00000384584 132 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 MIR518D-201ENST00000385014 87 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 MTCO2P33-201ENST00000402100 465 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.69□□□□□ -1.82
SRGAP3O43295 AC092047.1-201ENST00000424997 240 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 SSXP4-201ENST00000451349 245 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 SNRPGP5-201ENST00000456003 220 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 Y_RNA.703-201ENST00000516846 111 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 RNU2-31P-201ENST00000516954 155 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 FTX_3.1-201ENST00000610451 147 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 AC099778.2-201ENST00000610904 211 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 AC005296.1-201ENST00000616145 209 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.69□□□□□ -1.82
SRGAP3O43295 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SRGAP3O43295 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SRGAP3O43295 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.68□□□□□ -1.82
SRGAP3O43295 AC000403.1-201ENST00000613696 3585 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SRGAP3O43295 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SRGAP3O43295 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SRGAP3O43295 SNORA25.1-201ENST00000362326 128 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 RNU6-858P-201ENST00000362436 107 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 RNU6-942P-201ENST00000363002 107 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 Y_RNA.319-201ENST00000365138 92 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 RNU6-326P-201ENST00000365480 107 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 RNU6-142P-201ENST00000384019 107 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 RNU6-514P-201ENST00000384208 107 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 Y_RNA.504-201ENST00000384481 104 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 Y_RNA.569-201ENST00000384749 103 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 Y_RNA.626-201ENST00000411288 95 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 COX6CP10-201ENST00000416832 224 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 AC022018.1-201ENST00000430685 241 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.68□□□□□ -1.82
SRGAP3O43295 NDUFB4P6-201ENST00000436819 366 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 AC098831.1-201ENST00000440661 216 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 UQCRHP3-201ENST00000451503 251 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 MTATP6P7-201ENST00000453315 681 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.68□□□□□ -1.82
SRGAP3O43295 RPS29P26-201ENST00000477483 171 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 RN7SL633P-201ENST00000488974 297 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.68□□□□□ -1.82
SRGAP3O43295 Vault.1-201ENST00000516474 102 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 AC245166.1-201ENST00000521012 253 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 UBL5P4-201ENST00000562584 236 ntBASIC3.68□□□□□ -1.82
SRGAP3O43295 ZNF192P1-203ENST00000565888 810 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms