Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.5□□□□□ -2.01
ATP2A1O14983 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ATP2A1O14983 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATP2A1O14983 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATP2A1O14983 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ATP2A1O14983 MIRLET7G-201ENST00000362280 84 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 RNU1-72P-201ENST00000362976 153 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 Y_RNA.151-201ENST00000363566 112 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 RNU1-52P-201ENST00000384190 164 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 MIR548K-201ENST00000408406 116 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.49□□□□□ -2.01
ATP2A1O14983 NCOR1P3-201ENST00000420479 303 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AC003685.2-201ENST00000422795 395 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AIMP1P2-201ENST00000425294 312 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
ATP2A1O14983 HMGB1P18-201ENST00000438801 619 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AL031659.1-201ENST00000447075 539 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 MTND5P20-201ENST00000448677 143 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 PCMTD1P1-201ENST00000455560 355 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 MTND5P5-201ENST00000503764 376 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AC103851.1-201ENST00000506833 274 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.49□□□□□ -2.01
ATP2A1O14983 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.49□□□□□ -2.01
ATP2A1O14983 AC078795.3-201ENST00000602913 472 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AL161423.1-201ENST00000613700 262 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 AC092794.2-201ENST00000620933 563 ntBASIC2.49□□□□□ -2.01
ATP2A1O14983 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
ATP2A1O14983 Z82209.1-201ENST00000422141 2135 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATP2A1O14983 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATP2A1O14983 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ATP2A1O14983 Y_RNA.184-201ENST00000363884 108 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
ATP2A1O14983 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
ATP2A1O14983 SNORA67.3-201ENST00000384366 140 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 MIR517A-201ENST00000385001 87 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 AC078809.1-201ENST00000427601 140 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 MTND3P9-201ENST00000429526 346 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.48□□□□□ -2.01
ATP2A1O14983 AL133396.1-201ENST00000432048 687 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 MTND4P18-201ENST00000447010 465 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.48□□□□□ -2.01
ATP2A1O14983 AC073901.1-201ENST00000462471 408 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.48□□□□□ -2.01
ATP2A1O14983 RPL30P1-201ENST00000488676 339 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.48□□□□□ -2.01
ATP2A1O14983 PTP4A1P4-201ENST00000512479 322 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 Y_RNA.691-201ENST00000516611 103 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 DEFB122-202ENST00000569013 197 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.48□□□□□ -2.01
ATP2A1O14983 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.48□□□□□ -2.01
ATP2A1O14983 AC018889.1-201ENST00000605372 397 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 AC124303.1-201ENST00000605703 360 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 MIR8076-201ENST00000611401 83 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 TPTEP1-208ENST00000636884 213 ntBASIC2.48□□□□□ -2.01
ATP2A1O14983 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ATP2A1O14983 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATP2A1O14983 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATP2A1O14983 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATP2A1O14983 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ATP2A1O14983 RNU6-790P-201ENST00000384479 105 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 CBX3P9-201ENST00000402326 552 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.47□□□□□ -2.01
ATP2A1O14983 AC074085.1-201ENST00000413598 418 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 AL445646.1-201ENST00000431784 216 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 USP9YP8-201ENST00000441913 500 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 AL353572.1-201ENST00000442490 417 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ATP2A1O14983 AC107399.1-201ENST00000451226 265 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 SNRPGP7-201ENST00000469016 106 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 AC140059.1-201ENST00000489238 361 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 AC016632.1-201ENST00000503994 196 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 SNORA31.11-201ENST00000516528 139 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 Y_RNA.702-201ENST00000516843 96 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 RNU1-54P-201ENST00000517181 120 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.47□□□□□ -2.01
ATP2A1O14983 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.47□□□□□ -2.01
ATP2A1O14983 HSPE1P4-201ENST00000550617 308 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 AC019193.3-201ENST00000609144 554 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 AL449363.1-201ENST00000617815 186 ntBASIC2.47□□□□□ -2.01
ATP2A1O14983 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.46□□□□□ -2.02
ATP2A1O14983 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ATP2A1O14983 AC092268.1-201ENST00000342691 405 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 U3.13-201ENST00000364804 214 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 Y_RNA.339-201ENST00000365325 102 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 MIR521-1-201ENST00000384902 87 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
ATP2A1O14983 SNORA26.3-201ENST00000391119 136 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 AL356432.1-201ENST00000405809 419 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 MIR548F5-201ENST00000408421 86 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 RN7SKP158-201ENST00000410453 326 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.46□□□□□ -2.02
ATP2A1O14983 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.46□□□□□ -2.02
ATP2A1O14983 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.46□□□□□ -2.02
ATP2A1O14983 AL591806.2-201ENST00000433122 173 ntBASIC2.46□□□□□ -2.02
ATP2A1O14983 AC244670.1-201ENST00000436879 112 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms