Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AL590632.1-201ENST00000424289 371 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AL139415.2-201ENST00000431968 163 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 RPS15AP28-201ENST00000435088 386 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 IFNA20P-201ENST00000436840 528 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.17□□□□□ -2.06
CLDN4O14493 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN4O14493 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN4O14493 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 RNA5SP281-201ENST00000516504 135 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN4O14493 AC018630.3-201ENST00000542637 96 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AC021231.3-201ENST00000558497 370 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AC015712.3-201ENST00000559380 164 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 MIR3923-201ENST00000579521 83 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 MIR3942-201ENST00000585264 109 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AP003465.2-201ENST00000602571 373 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 Z98751.3-201ENST00000604447 521 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN4O14493 AC084782.3-201ENST00000612282 578 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AC092794.1-201ENST00000612734 582 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN4O14493 AC006504.8-201ENST00000621046 635 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AC007336.1-201ENST00000576365 3828 ntBASIC2.17□□□□□ -2.06
CLDN4O14493 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN4O14493 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN4O14493 RNU6-562P-201ENST00000362731 107 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 Y_RNA.123-201ENST00000363338 102 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 RNU6-95P-201ENST00000384697 107 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 RNU2-48P-201ENST00000410694 191 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 CBX3P6-201ENST00000430257 527 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN4O14493 AC069439.1-201ENST00000494739 167 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 RNU7-193P-201ENST00000516723 65 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 NDUFA5P6-201ENST00000542110 379 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 AC233702.2-202ENST00000562547 291 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 CPDP1-201ENST00000579660 283 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 MIR3976-201ENST00000606807 139 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CLDN4O14493 AL161423.1-201ENST00000613700 262 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 AC093913.1-201ENST00000614178 329 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 AL136221.1-201ENST00000621449 509 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 MIR6766-201ENST00000622641 72 ntBASIC2.16□□□□□ -2.06
CLDN4O14493 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN4O14493 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN4O14493 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.15□□□□□ -2.06
CLDN4O14493 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CLDN4O14493 Y_RNA.135-201ENST00000363439 95 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 Y_RNA.151-201ENST00000363566 112 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 Y_RNA.212-201ENST00000364177 102 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 RNU1-51P-201ENST00000365345 176 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 RNU6-790P-201ENST00000384479 105 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 RNU6-831P-201ENST00000384548 107 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 RNU6-482P-201ENST00000391068 107 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 MIR1294-201ENST00000408503 142 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 DPH3P2-201ENST00000422618 250 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 AL645568.3-201ENST00000433683 316 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 HMGB1P18-201ENST00000438801 619 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 AC108210.2-201ENST00000503681 201 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 AC021146.2-201ENST00000504736 556 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN4O14493 RNU6-567P-201ENST00000516746 107 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 HSPE1P18-201ENST00000517602 280 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 AC107953.1-201ENST00000522216 297 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 RPS3AP23-202ENST00000574601 686 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 SNORA59B-202ENST00000578183 701 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 AC023043.2-201ENST00000589678 1026 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.15□□□□□ -2.07
CLDN4O14493 AL031274.2-201ENST00000599419 203 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 AL133215.3-201ENST00000609801 448 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 AL132822.1-201ENST00000617063 513 ntBASIC2.15□□□□□ -2.07
CLDN4O14493 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
CLDN4O14493 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CLDN4O14493 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CLDN4O14493 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 Y_RNA.86-201ENST00000363020 111 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 SNORD32B-201ENST00000364460 84 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 RNU6-611P-201ENST00000384276 104 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 AL355497.1-201ENST00000406262 551 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 MTCYBP2-201ENST00000407745 171 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.14□□□□□ -2.07
CLDN4O14493 EIF1AXP1-201ENST00000419267 435 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN4O14493 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN4O14493 MTND1P11-201ENST00000456661 876 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 AC130509.1-201ENST00000464158 433 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.14□□□□□ -2.07
CLDN4O14493 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.14□□□□□ -2.07
CLDN4O14493 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN4O14493 MIR449C-201ENST00000516047 92 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 RNU6-864P-201ENST00000516256 108 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 CYP4A27P-201ENST00000567218 190 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.14□□□□□ -2.07
CLDN4O14493 AC026271.5-201ENST00000577873 130 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.14□□□□□ -2.07
CLDN4O14493 SNRPGP17-201ENST00000603780 214 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.14□□□□□ -2.07
CLDN4O14493 MIR8076-201ENST00000611401 83 ntBASIC2.14□□□□□ -2.07
CLDN4O14493 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms