Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC064859.1-201ENST00000624741 174 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 AC099654.12-201ENST00000639868 649 ntBASIC1.86□□□□□ -2.11
SLC28A1O00337 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC28A1O00337 AC121333.1-201ENST00000567488 2709 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 Y_RNA.167-201ENST00000363735 109 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 RNU6-522P-201ENST00000364497 107 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 RNU6-378P-201ENST00000384324 107 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 RNU6-160P-201ENST00000384591 107 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SLC28A1O00337 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC28A1O00337 Z98742.3-201ENST00000418637 326 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 AL139413.1-201ENST00000421309 217 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 AC012306.1-201ENST00000423267 114 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 MTND3P9-201ENST00000429526 346 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 DLGAP5P1-201ENST00000430307 464 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC28A1O00337 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC28A1O00337 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC28A1O00337 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC28A1O00337 RPL9P9-202ENST00000466501 579 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 UBE2DNL-203ENST00000474922 222 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 AC114801.2-201ENST00000503825 781 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 AC021146.2-201ENST00000504736 556 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 RNU6-506P-201ENST00000516553 94 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 AK6P1-201ENST00000540219 478 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 EIF4A1P12-201ENST00000551910 141 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 SCOCP1-201ENST00000554676 349 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC28A1O00337 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC28A1O00337 AC087241.4-201ENST00000612441 480 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 AC015540.1-201ENST00000615828 501 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 AC130454.1-201ENST00000622948 401 ntBASIC1.85□□□□□ -2.11
SLC28A1O00337 FER-210ENST00000628534 558 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC28A1O00337 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.84□□□□□ -2.11
SLC28A1O00337 RNU6-23P-201ENST00000363283 107 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 RNU6-1317P-201ENST00000364582 104 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 UBE2V1P4-201ENST00000425374 344 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 MTND3P21-201ENST00000433774 331 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC28A1O00337 MTCO2P7-201ENST00000446518 666 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 RPL23AP6-201ENST00000446637 472 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 FTH1P25-201ENST00000447665 469 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 RPS29P27-201ENST00000463711 170 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 RNU6-314P-201ENST00000516574 104 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC28A1O00337 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.84□□□□□ -2.11
SLC28A1O00337 AC016256.1-201ENST00000547971 354 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.84□□□□□ -2.11
SLC28A1O00337 AC010525.2-201ENST00000590920 195 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 BNIP3P25-201ENST00000596023 559 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.84□□□□□ -2.11
SLC28A1O00337 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 AL773524.1-201ENST00000614065 229 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 U1.36-201ENST00000620684 176 ntBASIC1.84□□□□□ -2.11
SLC28A1O00337 AC233981.2-201ENST00000611524 1614 ntBASIC1.84□□□□□ -2.12
SLC28A1O00337 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.83□□□□□ -2.12
SLC28A1O00337 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SLC28A1O00337 Y_RNA.41-201ENST00000362646 102 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 Y_RNA.332-201ENST00000365271 113 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 MIR676-201ENST00000390702 67 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 AL590002.1-201ENST00000406554 418 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 RNU6-908P-201ENST00000410160 94 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 AC244636.1-201ENST00000421152 228 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.83□□□□□ -2.12
SLC28A1O00337 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.83□□□□□ -2.12
SLC28A1O00337 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
SLC28A1O00337 AMD1P1-201ENST00000457220 922 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.83□□□□□ -2.12
SLC28A1O00337 AC083904.1-201ENST00000487828 231 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 AC092436.3-201ENST00000511788 257 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.83□□□□□ -2.12
SLC28A1O00337 RNU6-1332P-201ENST00000516666 104 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.83□□□□□ -2.12
SLC28A1O00337 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
SLC28A1O00337 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.83□□□□□ -2.12
SLC28A1O00337 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 AC064807.4-201ENST00000607201 407 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 AC005520.5-201ENST00000613926 164 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
SLC28A1O00337 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SLC28A1O00337 RNU6-623P-201ENST00000363143 105 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 RNU6-438P-201ENST00000365561 103 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 SNORA8-201ENST00000384574 139 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 RNU4-26P-201ENST00000410270 107 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 RNU2-20P-201ENST00000410425 191 ntBASIC1.82□□□□□ -2.12
SLC28A1O00337 RN7SKP223-201ENST00000410582 62 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms