Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RNU6-297P-201ENST00000384636 107 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 MRPL35P1-201ENST00000404272 572 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.33□□□□□ -2.2
AP3B1O00203 AL117339.3-201ENST00000418733 162 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 MTCO3P29-201ENST00000432119 779 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.33□□□□□ -2.2
AP3B1O00203 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.33□□□□□ -2.2
AP3B1O00203 LRRC34P2-201ENST00000514850 553 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 AC019176.1-201ENST00000518519 225 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 EIF4A1P12-201ENST00000551910 141 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.33□□□□□ -2.2
AP3B1O00203 MIR4703-201ENST00000577728 79 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.33□□□□□ -2.2
AP3B1O00203 Z84480.1-201ENST00000605131 311 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 AC006566.1-201ENST00000608943 513 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 PCGEM1.1-201ENST00000613431 131 ntBASIC1.33□□□□□ -2.2
AP3B1O00203 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.33□□□□□ -2.2
AP3B1O00203 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
AP3B1O00203 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
AP3B1O00203 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
AP3B1O00203 RNU1-17P-201ENST00000363022 152 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 RNU4-48P-201ENST00000365559 182 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 Y_RNA.480-201ENST00000384364 102 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 SNORA26.3-201ENST00000391119 136 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 RNU2-41P-201ENST00000410991 178 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 RPL37P10-201ENST00000412884 288 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 EIF1P1-201ENST00000421436 341 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 SNAP23P1-201ENST00000433229 246 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.32□□□□□ -2.2
AP3B1O00203 PRPS1P1-201ENST00000445305 876 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.32□□□□□ -2.2
AP3B1O00203 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.32□□□□□ -2.2
AP3B1O00203 AC016925.1-201ENST00000458303 298 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 RNU1-123P-201ENST00000458950 160 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 TOMM22P6-201ENST00000465035 409 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 AC079382.1-201ENST00000493346 557 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.32□□□□□ -2.2
AP3B1O00203 MTCYBP18-201ENST00000501056 747 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 MTCO3P28-201ENST00000513351 515 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.32□□□□□ -2.2
AP3B1O00203 RNU2-69P-201ENST00000516061 100 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 SNORA25.17-201ENST00000517184 124 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.32□□□□□ -2.2
AP3B1O00203 AC064872.1-201ENST00000604823 1072 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 AL360219.1-201ENST00000610230 366 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 uc_338.11-201ENST00000619132 160 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 MIR7843-201ENST00000622274 79 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 AC005858.4-201ENST00000623191 700 ntBASIC1.32□□□□□ -2.2
AP3B1O00203 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.32□□□□□ -2.2
AP3B1O00203 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
AP3B1O00203 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
AP3B1O00203 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
AP3B1O00203 RNU4-21P-201ENST00000362802 126 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 RNU6-862P-201ENST00000362804 105 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 Y_RNA.132-201ENST00000363421 102 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 RNU5A-2P-201ENST00000384337 116 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 RNU6-434P-201ENST00000384376 107 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 RNU6-1127P-201ENST00000384580 107 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 SNORA16.2-201ENST00000390991 127 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 SNORD70.1-201ENST00000391007 85 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 AL161935.2-201ENST00000414627 60 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.31□□□□□ -2.2
AP3B1O00203 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
AP3B1O00203 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.31□□□□□ -2.2
AP3B1O00203 RPL23AP95-201ENST00000426806 265 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 AL133396.1-201ENST00000432048 687 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.31□□□□□ -2.2
AP3B1O00203 AC245047.4-201ENST00000433189 144 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 MTND1P18-201ENST00000448191 573 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.31□□□□□ -2.2
AP3B1O00203 snoU13.30-201ENST00000458951 104 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 SNORD42A-201ENST00000459584 64 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.31□□□□□ -2.2
AP3B1O00203 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.31□□□□□ -2.2
AP3B1O00203 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.31□□□□□ -2.2
AP3B1O00203 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.31□□□□□ -2.2
AP3B1O00203 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.31□□□□□ -2.2
AP3B1O00203 MTND1P24-201ENST00000552175 861 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 MIR3915-201ENST00000578518 97 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 AC245014.2-201ENST00000603689 287 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 AC246785.4-201ENST00000605374 287 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
AP3B1O00203 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.31□□□□□ -2.2
AP3B1O00203 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
AP3B1O00203 RNU1-96P-201ENST00000364163 162 ntBASIC1.3□□□□□ -2.2
AP3B1O00203 RNU6-282P-201ENST00000365357 103 ntBASIC1.3□□□□□ -2.2
AP3B1O00203 MIR764-201ENST00000390811 85 ntBASIC1.3□□□□□ -2.2
AP3B1O00203 SNORA12.2-201ENST00000391040 156 ntBASIC1.3□□□□□ -2.2
AP3B1O00203 SNORA11.2-201ENST00000408318 127 ntBASIC1.3□□□□□ -2.2
AP3B1O00203 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.3□□□□□ -2.2
AP3B1O00203 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.3□□□□□ -2.2
AP3B1O00203 AC099677.2-201ENST00000436385 175 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms