Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU4-42P-201ENST00000364738 142 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 RNU6-1329P-201ENST00000365664 107 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 Y_RNA.402-201ENST00000383972 102 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 RNU6-611P-201ENST00000384276 104 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 BTF3L4P2-201ENST00000392798 346 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 MIR1294-201ENST00000408503 142 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 RN7SKP61-201ENST00000410642 295 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 Y_RNA.615-201ENST00000410769 117 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.84□□□□□ -2.11
PDLIM1O00151 RPL23AP6-201ENST00000446637 472 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.84□□□□□ -2.11
PDLIM1O00151 AC008628.2-201ENST00000502605 298 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.84□□□□□ -2.11
PDLIM1O00151 RNU6-1332P-201ENST00000516666 104 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 SNORA31.16-201ENST00000516773 139 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 RNU6-612P-201ENST00000516909 102 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.84□□□□□ -2.11
PDLIM1O00151 AC024614.2-201ENST00000577584 372 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 MIR3923-201ENST00000579521 83 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 AC064807.4-201ENST00000607201 407 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.84□□□□□ -2.11
PDLIM1O00151 AC009541.1-201ENST00000438279 2662 ntBASIC1.84□□□□□ -2.12
PDLIM1O00151 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.83□□□□□ -2.12
PDLIM1O00151 SNORA67.3-201ENST00000384366 140 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 Y_RNA.554-201ENST00000384672 102 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PDLIM1O00151 AL356432.1-201ENST00000405809 419 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 RNU2-2P-201ENST00000410396 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AP000275.1-201ENST00000411943 390 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.83□□□□□ -2.12
PDLIM1O00151 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AL133396.1-201ENST00000432048 687 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.83□□□□□ -2.12
PDLIM1O00151 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.83□□□□□ -2.12
PDLIM1O00151 U8.21-201ENST00000459536 136 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC104564.1-201ENST00000493028 407 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.83□□□□□ -2.12
PDLIM1O00151 AC091874.1-201ENST00000511402 339 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 Y_RNA.655-201ENST00000515919 96 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.83□□□□□ -2.12
PDLIM1O00151 IGKV3-31-201ENST00000523109 329 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC109635.3-201ENST00000529536 185 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC018630.3-201ENST00000542637 96 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 ZNF519P2-201ENST00000557032 169 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 EIF1P4-201ENST00000572664 335 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC243960.4-201ENST00000600532 288 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC068944.2-201ENST00000610373 403 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 Y_RNA.783-201ENST00000613546 102 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AL132822.1-201ENST00000617063 513 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.83□□□□□ -2.12
PDLIM1O00151 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PDLIM1O00151 MTND4P23-201ENST00000447723 1363 ntBASIC1.83□□□□□ -2.12
PDLIM1O00151 AC121333.1-201ENST00000567488 2709 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 RNA5SP276-201ENST00000362580 94 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 RNY3P3-201ENST00000363816 102 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 RNU6-1215P-201ENST00000384441 102 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 RNU6-997P-201ENST00000384725 107 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 SNORA12-201ENST00000391162 147 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 RNU2-48P-201ENST00000410694 191 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.82□□□□□ -2.12
PDLIM1O00151 RPL23AP95-201ENST00000426806 265 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 MTND3P9-201ENST00000429526 346 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 AL353689.1-201ENST00000438895 199 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.82□□□□□ -2.12
PDLIM1O00151 PRELID3BP1-201ENST00000457142 540 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 AMD1P1-201ENST00000457220 922 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.82□□□□□ -2.12
PDLIM1O00151 AC092436.3-201ENST00000511788 257 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 AC025465.4-201ENST00000513422 638 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 MIR449C-201ENST00000516047 92 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.82□□□□□ -2.12
PDLIM1O00151 AC109446.1-201ENST00000566172 220 ntBASIC1.82□□□□□ -2.12
PDLIM1O00151 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM1O00151 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM1O00151 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM1O00151 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM1O00151 RNU6-227P-201ENST00000362865 103 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 Y_RNA.167-201ENST00000363735 109 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 RNU6-522P-201ENST00000364497 107 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 RNU6-1317P-201ENST00000364582 104 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 RNU4-12P-201ENST00000365233 139 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 Y_RNA.516-201ENST00000384541 124 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 RNU6-332P-201ENST00000391193 108 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PDLIM1O00151 AC245102.2-201ENST00000448956 180 ntBASIC1.81□□□□□ -2.12
PDLIM1O00151 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.81□□□□□ -2.12
PDLIM1O00151 AC091435.1-201ENST00000505442 584 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms