Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 SNORD60.2-201ENST00000516883 86 ntBASIC2.12□□□□□ -2.07
HMGB1P1B2RPK0 AL157687.1-201ENST00000554853 619 ntBASIC2.12□□□□□ -2.07
HMGB1P1B2RPK0 MIR5006-201ENST00000583027 110 ntBASIC2.12□□□□□ -2.07
HMGB1P1B2RPK0 AC069114.2-201ENST00000604699 304 ntBASIC2.12□□□□□ -2.07
HMGB1P1B2RPK0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMGB1P1B2RPK0 SNORA71.3-201ENST00000362582 128 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 RNU6-82P-201ENST00000363970 107 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 RNU6-1042P-201ENST00000384204 107 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 MIR521-1-201ENST00000384902 87 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 MIR1267-201ENST00000408723 78 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 SNORA11.4-201ENST00000408823 129 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AC004386.2-201ENST00000441858 148 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AC016717.1-201ENST00000448918 286 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 SNORA84-201ENST00000459229 133 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 RNU6-261P-201ENST00000459506 102 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 Y_RNA.654-201ENST00000497848 106 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 RNA5SP437-201ENST00000517249 129 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AP003034.1-201ENST00000534621 422 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 MIR3122-201ENST00000577243 73 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AC025811.1-201ENST00000604312 472 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 CTHRC1P1-201ENST00000605383 469 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AC026790.2-201ENST00000606282 430 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 MIR3976-201ENST00000606807 139 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AC005562.2-201ENST00000618264 111 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 MIR8063-201ENST00000621930 81 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AC097520.1-201ENST00000624435 385 ntBASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGB1P1B2RPK0 MTND5P26-201ENST00000426018 1752 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 RNU6-1322P-201ENST00000364309 107 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 SNORD116-9-201ENST00000384000 95 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 RNU6-968P-201ENST00000384076 107 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 SNORD116-3-201ENST00000384287 95 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 SNORD116-7-201ENST00000384404 95 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 SNORD116-5-201ENST00000384462 95 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 MIR548B-201ENST00000385247 97 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 RNU6-325P-201ENST00000411132 105 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 GTF3AP2-201ENST00000557014 266 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 RPL17P51-201ENST00000605218 238 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AC104458.1-201ENST00000608243 463 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AC100821.1-201ENST00000523153 2479 ntBASIC2.1□□□□□ -2.07
HMGB1P1B2RPK0 AC010615.1-201ENST00000594254 1764 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 MIR520A-201ENST00000384862 85 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 AC245047.4-201ENST00000433189 144 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 AL359672.1-201ENST00000442302 409 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 AC027575.1-201ENST00000481064 460 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 AC083904.1-201ENST00000487828 231 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 RPL36AP21-201ENST00000490372 323 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 RN7SL636P-201ENST00000497504 294 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 MIR4753-201ENST00000585119 83 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 AP000907.4-201ENST00000604143 237 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 AC126177.8-201ENST00000618339 1015 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 MIR6075-201ENST00000620782 95 ntBASIC2.09□□□□□ -2.07
HMGB1P1B2RPK0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HMGB1P1B2RPK0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 Y_RNA.67-201ENST00000362870 100 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 RNU6-1085P-201ENST00000363576 107 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 MIR1283-1-201ENST00000408494 87 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 ARL5AP1-201ENST00000418991 388 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 AC060773.1-201ENST00000421698 310 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 USP9YP14-201ENST00000430663 563 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 RNU6-1208P-201ENST00000459588 107 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 RPL7P49-201ENST00000471402 708 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 SCOCP1-201ENST00000554676 349 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 MIR4444-1-201ENST00000581696 74 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 MIR4444-2-201ENST00000584390 74 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 MIR6817-201ENST00000615588 66 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 AL137790.1-201ENST00000634283 177 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 OR5AK4P-201ENST00000635912 903 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.08□□□□□ -2.08
HMGB1P1B2RPK0 RNU6-562P-201ENST00000362731 107 ntBASIC2.07□□□□□ -2.08
HMGB1P1B2RPK0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms