Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC060773.1-201ENST00000421698 310 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 MTATP6P16-201ENST00000434543 526 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AC012308.1-201ENST00000451232 178 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 SNORA31.10-201ENST00000516482 106 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AC090049.2-201ENST00000550377 109 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 SNRPGP1-201ENST00000553864 222 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 SUB1P2-201ENST00000556401 297 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 MTND1P15-201ENST00000579262 949 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AC064807.4-201ENST00000607201 407 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AL136317.1-201ENST00000612653 226 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 uc_338.34-201ENST00000617467 174 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 AL603839.4-201ENST00000624658 1005 ntBASIC-0.35□□□□□ -2.47
CPSF4LA6NMK7 RNU6-432P-201ENST00000384196 109 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 MIR489-201ENST00000384923 84 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 MIR644A-201ENST00000385262 94 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 RNA5SP323-201ENST00000391094 133 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 MIR1827-201ENST00000408549 66 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 DPRXP1-201ENST00000426312 460 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AC243964.1-201ENST00000441814 261 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AC016717.1-201ENST00000448918 286 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 RPL39P39-201ENST00000455840 151 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AC016925.1-201ENST00000458303 298 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 RNU6-856P-201ENST00000516959 98 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AC022868.1-201ENST00000517767 391 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AP002001.1-203ENST00000534002 267 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AC016256.1-201ENST00000547971 354 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 RNU6-94P-201ENST00000607728 107 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 AL357075.2-201ENST00000614906 189 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 MIR2909-201ENST00000617113 69 ntBASIC-0.36□□□□□ -2.47
CPSF4LA6NMK7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 RNU4-76P-201ENST00000364509 141 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 SNORA72.2-201ENST00000365028 127 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 RNU6-756P-201ENST00000383997 107 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 MIR214-201ENST00000385214 110 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AL359634.1-202ENST00000404721 284 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AL606517.2-201ENST00000442855 241 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 ART2BP-201ENST00000453501 499 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 OR9P1P-201ENST00000496431 281 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 RBBP4P6-201ENST00000508098 202 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 SNORA25.12-201ENST00000516202 82 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 RNU6-917P-201ENST00000516294 104 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 SNORA40.12-201ENST00000516329 111 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AC023538.1-201ENST00000534576 736 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AC091135.1-201ENST00000585943 307 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AC112187.2-201ENST00000604345 283 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AC004832.4-201ENST00000608952 331 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AL096861.1-201ENST00000610899 123 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AL513423.1-201ENST00000621695 132 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 AC067863.3-201ENST00000624172 122 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 MIR338-201ENST00000636369 67 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 MIR1322-201ENST00000638013 71 ntBASIC-0.37□□□□□ -2.47
CPSF4LA6NMK7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 MIR103A2-201ENST00000362154 78 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 RNU4-15P-201ENST00000362613 141 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 RNU6-492P-201ENST00000363035 104 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 RNU4-41P-201ENST00000364426 143 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 MIR145-201ENST00000384967 88 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 RNA5SP109-201ENST00000391010 116 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 SNORD71-201ENST00000411292 86 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AC010154.1-201ENST00000425857 269 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 ELOCP30-201ENST00000447108 299 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 MTND2P33-201ENST00000506452 1031 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 RNA5SP330-201ENST00000517096 96 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AF235103.2-201ENST00000525753 346 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AP003049.1-201ENST00000529418 457 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AC018889.1-201ENST00000605372 397 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 AC015726.2-201ENST00000620112 122 ntBASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.38□□□□□ -2.47
CPSF4LA6NMK7 SNORD118-201ENST00000363593 134 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms