Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 BNIP3P10-201ENST00000605360 577 ntBASIC0.99□□□□□ -2.25
RBFOX3A6NFN3 uc_338.11-201ENST00000619132 160 ntBASIC0.99□□□□□ -2.25
RBFOX3A6NFN3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.99□□□□□ -2.25
RBFOX3A6NFN3 AL450472.1-202ENST00000637286 180 ntBASIC0.99□□□□□ -2.25
RBFOX3A6NFN3 ZNF209P-201ENST00000593450 2304 ntBASIC0.99□□□□□ -2.25
RBFOX3A6NFN3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 RNU6-552P-201ENST00000362869 119 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 RNU6-1097P-201ENST00000363586 107 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 RNU6-108P-201ENST00000365558 107 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 MIR194-1-201ENST00000384892 85 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 MIR618-201ENST00000385287 98 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 MRPL35P1-201ENST00000404272 572 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 RNU6-174P-201ENST00000410406 106 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 RPS3AP3-201ENST00000411933 242 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 MTND5P25-201ENST00000430499 799 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC069257.2-201ENST00000441819 155 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 snoU13.30-201ENST00000458951 104 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC079382.1-201ENST00000493346 557 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC005178.1-201ENST00000508392 440 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 RNU5F-4P-201ENST00000516581 114 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 RNU6-856P-201ENST00000516959 98 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AP003033.1-201ENST00000527244 415 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC084364.2-201ENST00000546924 395 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC019288.1-201ENST00000557918 224 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC021231.3-201ENST00000558497 370 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 CYP4A27P-201ENST00000567218 190 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 MIR3937-201ENST00000580135 106 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 MIR4303-201ENST00000581299 66 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 BNIP3P8-201ENST00000597863 560 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 Z98751.3-201ENST00000604447 521 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC009994.1-201ENST00000606889 253 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 AC136475.10-201ENST00000620253 385 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 SEPT14P19-203ENST00000633205 211 ntBASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
RBFOX3A6NFN3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 RNU6-378P-201ENST00000384324 107 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AL117342.1-201ENST00000404861 406 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 RNU4-62P-201ENST00000410125 130 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 RPL23AP36-201ENST00000413895 458 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 MTND3P17-201ENST00000416968 344 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 BTF3P4-201ENST00000418852 495 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 CST2P1-201ENST00000425770 87 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 RPS29P28-201ENST00000446439 141 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 MTCYBP18-201ENST00000501056 747 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 RNA5SP503-201ENST00000517047 117 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 SNORA25.17-201ENST00000517184 124 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AC019176.1-201ENST00000518519 225 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 DNAJC19P9-201ENST00000555084 351 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AC245884.10-201ENST00000597355 337 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AL645939.4-201ENST00000604495 135 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 CTHRC1P1-201ENST00000605383 469 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AC092354.1-201ENST00000606057 376 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 MIR3976-201ENST00000606807 139 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 AL353149.1-201ENST00000610667 244 ntBASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
RBFOX3A6NFN3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 RNU1-96P-201ENST00000364163 162 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 RNU6-1029P-201ENST00000384109 107 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 RNU6-434P-201ENST00000384376 107 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 RNU6-1026P-201ENST00000384465 108 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 RNU6-393P-201ENST00000384475 107 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 SNORA17.3-201ENST00000391159 129 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 Y_RNA.595-201ENST00000410403 105 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 TOMM22P2-201ENST00000430735 237 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 MTCO3P29-201ENST00000432119 779 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AC009961.2-201ENST00000435771 251 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 PRPS1P1-201ENST00000445305 876 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 RNU1-123P-201ENST00000458950 160 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 RNU2-69P-201ENST00000516061 100 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AL161670.1-201ENST00000554348 137 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 MTCO3P23-201ENST00000561363 289 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AC064807.4-201ENST00000607201 407 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.96□□□□□ -2.26
RBFOX3A6NFN3 AL136221.1-201ENST00000621449 509 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms