Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC010975.2-201ENST00000427781 588 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AC245047.7-201ENST00000440265 293 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 RPS27P22-201ENST00000478056 241 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 RPS23P5-201ENST00000495419 428 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AC067942.3-201ENST00000512025 362 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-1003P-201ENST00000517099 105 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AC107934.1-201ENST00000522215 217 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AC011604.1-201ENST00000545978 196 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 EIF4A1P12-201ENST00000551910 141 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AL513534.2-201ENST00000603836 250 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 CTHRC1P1-201ENST00000605383 469 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AC084824.5-201ENST00000612009 413 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 MIR338-201ENST00000636369 67 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-433P-201ENST00000363216 104 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 RNU4-12P-201ENST00000365233 139 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 SNORA80D-201ENST00000384488 135 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AC011233.1-201ENST00000422812 283 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AL163973.1-201ENST00000484753 577 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 RNA5SP255-201ENST00000516370 107 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 DEFB108E-201ENST00000524692 240 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 MTATP6P15-201ENST00000527233 835 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AP003484.1-201ENST00000530974 250 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 CYP4A27P-201ENST00000567218 190 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 MIR4742-201ENST00000581069 85 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AL606834.3-201ENST00000602615 496 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 MIR6504-201ENST00000613520 61 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 AC106858.1-201ENST00000637497 429 ntBASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
TRAV4A0A0B4J268 RNU1-76P-201ENST00000362903 159 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 Y_RNA.191-201ENST00000363972 113 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 RPS20P2-201ENST00000402520 389 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 RNU6-293P-201ENST00000411259 106 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 MTCO3P18-201ENST00000440206 761 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 MTND1P12-201ENST00000455231 147 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 Y_RNA.638-201ENST00000459374 113 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 AC007547.1-201ENST00000462177 490 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 MTCO3P7-201ENST00000510008 774 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 FABP5P5-201ENST00000515537 406 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 RNU6-377P-201ENST00000515965 102 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 MTATP6P3-201ENST00000581686 676 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 MIR4307-201ENST00000582802 84 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 AL031281.1-201ENST00000604049 488 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 AL353765.1-201ENST00000605514 183 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 AC009229.3-201ENST00000608056 282 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 AC021506.2-201ENST00000612354 169 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 AC136475.10-201ENST00000620253 385 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 Z69720.2-201ENST00000624755 279 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.39□□□□□ -2.35
TRAV4A0A0B4J268 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 SNORD114-22-201ENST00000365423 72 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AF228730.1-201ENST00000397972 663 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 EEF1A1P40-201ENST00000412883 573 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AC114491.1-201ENST00000416095 246 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 RPL23AP95-201ENST00000426806 265 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 CETN4P-201ENST00000432407 469 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AC073614.1-201ENST00000438690 650 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AC105758.1-201ENST00000506038 399 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AC112206.4-201ENST00000515142 405 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 RNU2-34P-201ENST00000516534 121 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 APOOP3-201ENST00000536787 586 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 TMF1P1-201ENST00000576058 373 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 MIR3124-201ENST00000582636 67 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AL929325.1-201ENST00000603096 117 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AL592221.1-201ENST00000605266 382 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 GHRLOS.1-201ENST00000610995 70 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 PART1_2.1-201ENST00000612397 250 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 MIR8070-201ENST00000616510 88 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 SNORD3E-202ENST00000627253 216 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 BX322639.1-202ENST00000423987 2213 ntBASIC0.38□□□□□ -2.35
TRAV4A0A0B4J268 AC023934.1-201ENST00000574529 2389 ntBASIC0.37□□□□□ -2.35
TRAV4A0A0B4J268 SNORD56.2-201ENST00000363242 71 ntBASIC0.37□□□□□ -2.35
TRAV4A0A0B4J268 RNU6-418P-201ENST00000384035 107 ntBASIC0.37□□□□□ -2.35
TRAV4A0A0B4J268 RPL21P1-201ENST00000399532 476 ntBASIC0.37□□□□□ -2.35
TRAV4A0A0B4J268 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV4A0A0B4J268 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV4A0A0B4J268 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms