Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 SCARNA18-201ENST00000459004 134 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNA5SP269-201ENST00000459032 137 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORD42A-201ENST00000459584 64 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC079140.5-201ENST00000507882 310 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC091874.1-201ENST00000511402 339 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RN7SKP287-201ENST00000516546 266 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-1098P-201ENST00000516772 96 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MTND1P24-201ENST00000552175 861 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 Z98751.3-201ENST00000604447 521 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC069114.2-201ENST00000604699 304 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC093424.1-201ENST00000604999 338 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL360219.1-201ENST00000610230 366 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL157834.3-201ENST00000615543 103 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC136475.10-201ENST00000620253 385 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MIR8063-201ENST00000621930 81 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.01□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL161722.3-201ENST00000605789 2983 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL159152.1-201ENST00000635019 2587 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 FGF7P2-201ENST00000332473 296 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU4-21P-201ENST00000362802 126 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORD31B-201ENST00000364977 69 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-378P-201ENST00000384324 107 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-1026P-201ENST00000384465 108 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MIR520A-201ENST00000384862 85 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MT-TH-201ENST00000387441 69 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU2-7P-201ENST00000410794 178 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 EBAG9P1-201ENST00000418955 543 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC002486.1-201ENST00000435098 391 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 HSPE1P9-201ENST00000440046 311 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 ATP5J2P3-201ENST00000451550 258 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNRPGP9-201ENST00000456025 225 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RPL36AP21-201ENST00000490372 323 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNA5SP445-201ENST00000515889 115 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-567P-201ENST00000516746 107 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORD60.2-201ENST00000516883 86 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC069113.1-201ENST00000517763 267 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AP002963.1-201ENST00000530590 184 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 EIF4A1P12-201ENST00000551910 141 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC021231.3-201ENST00000558497 370 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 CYP4A27P-201ENST00000567218 190 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AGGF1P4-201ENST00000568249 801 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC090517.1-201ENST00000569307 266 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORA77B-201ENST00000578179 125 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MIR3660-201ENST00000584845 100 ntBASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC100821.1-201ENST00000523153 2479 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 WWP1P1-201ENST00000466609 2769 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 ICE2P2-201ENST00000483823 2787 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 Y_RNA.201-201ENST00000364052 96 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 SNORA36A-201ENST00000384221 132 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU5A-2P-201ENST00000384337 116 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNY3P10-201ENST00000384764 102 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MIR208B-201ENST00000401172 77 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU2-9P-201ENST00000410194 145 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL365203.2-201ENST00000423444 196 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC099677.2-201ENST00000436385 175 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 JTBP1-201ENST00000441314 247 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC245517.4-201ENST00000448601 281 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC016925.1-201ENST00000458303 298 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 snoU13.30-201ENST00000458951 104 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RPL9P9-202ENST00000466501 579 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 GMFBP1-201ENST00000467831 427 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RPS26P55-201ENST00000471178 356 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RPL26P26-201ENST00000480251 434 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNA5SP437-201ENST00000517249 129 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AC060788.1-201ENST00000521318 469 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 MIR4524B-201ENST00000581569 115 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AP001836.1-201ENST00000604675 523 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 AL450472.1-202ENST00000637286 180 ntBASIC0.99□□□□□ -2.25
IGHV3-43A0A0B4J1X8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-862P-201ENST00000362804 105 ntBASIC0.98□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU6-181P-201ENST00000363225 107 ntBASIC0.98□□□□□ -2.25
IGHV3-43A0A0B4J1X8 RNU4-91P-201ENST00000364778 135 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms