Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AC008669.1-201ENST00000565823 2178 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 RNU1-109P-201ENST00000383960 147 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-843P-201ENST00000384454 104 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 MTCYBP2-201ENST00000407745 171 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 SNORD88.1-201ENST00000408684 91 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 EIF1AXP1-201ENST00000419267 435 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 RPS15AP5-201ENST00000436276 388 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 MTND3P2-201ENST00000438452 342 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AL161651.1-201ENST00000440882 223 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AIG1P1-201ENST00000503376 148 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 RNU6-764P-201ENST00000516396 105 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 SNORD19.2-201ENST00000516978 73 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 ACA59.2-201ENST00000517061 156 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AC144568.1-201ENST00000520139 137 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AL590705.4-201ENST00000532209 134 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 MIR4319-201ENST00000577285 85 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AL359198.2-201ENST00000611836 194 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AC008121.3-201ENST00000618726 433 ntBASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SSX2IPQ9Y2D8 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AC023141.4-201ENST00000412031 328 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AC007969.2-201ENST00000441891 191 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AL513124.1-201ENST00000450410 614 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 RPS29P12-201ENST00000460178 152 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 RNU5F-8P-201ENST00000515941 111 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 RNA5SP76-201ENST00000516277 87 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 RNU4-77P-201ENST00000516692 156 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.09□□□□□ -1.91
SSX2IPQ9Y2D8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.09□□□□□ -1.92
SSX2IPQ9Y2D8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
SSX2IPQ9Y2D8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
SSX2IPQ9Y2D8 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AC062016.1-201ENST00000355719 319 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.424-201ENST00000384063 103 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-1046P-201ENST00000516538 107 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 SNORA31.23-201ENST00000517219 133 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 HSBP1P1-201ENST00000555205 166 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AC107871.2-201ENST00000612894 502 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AL136360.1-201ENST00000503377 1900 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AC138915.1-201ENST00000565427 1685 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 AL161431.1-201ENST00000618966 4205 ntBASIC3.08□□□□□ -1.92
SSX2IPQ9Y2D8 MIR449A-201ENST00000362113 91 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 RNU4-42P-201ENST00000364738 142 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-487P-201ENST00000365430 104 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.455-201ENST00000384230 98 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.527-201ENST00000384573 102 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AL356057.3-201ENST00000402607 340 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 RNA5SP390-201ENST00000410191 113 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-101P-201ENST00000410323 104 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.605-201ENST00000410577 105 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 RNA5SP494-201ENST00000410653 129 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AL358176.2-201ENST00000425769 204 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AC092423.1-201ENST00000430165 186 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AL031659.1-201ENST00000447075 539 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AL353752.1-201ENST00000454946 260 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AC112492.4-201ENST00000456549 352 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 RNU7-175P-201ENST00000515915 61 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 RN7SKP132-201ENST00000516001 208 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 SNORA40.14-201ENST00000516543 86 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 CKS1BP7-201ENST00000522230 235 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AC104581.2-201ENST00000572227 430 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AC060766.3-201ENST00000591442 263 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AC016727.2-201ENST00000603988 621 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AC104695.3-201ENST00000604052 296 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AP000942.4-201ENST00000604811 241 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 SNORD58B-201ENST00000607313 66 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 MIR1244-1-201ENST00000612829 85 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 MIR1244-3-201ENST00000635744 85 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 MIR4272-201ENST00000635924 64 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 MIR1244-2-201ENST00000636449 85 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 291.3 ms