Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RN7SKP61-201ENST00000410642 295 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 RNU2-32P-201ENST00000411193 191 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AC096920.1-201ENST00000423991 241 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 RPL23AP95-201ENST00000426806 265 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AL121890.1-201ENST00000435457 205 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 Y_RNA.654-201ENST00000497848 106 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 HMGB1P35-201ENST00000503360 598 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AC022447.4-201ENST00000504053 364 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AK3P2-201ENST00000507976 429 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 RNU6-1069P-201ENST00000516612 133 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AL512360.1-201ENST00000555346 234 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 HMGB1P33-201ENST00000563485 527 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AC107304.1-201ENST00000604229 296 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AL132822.1-201ENST00000617063 513 ntBASIC1.59□□□□□ -2.15
TRAPPC4Q9Y296 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-623P-201ENST00000363143 105 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 U3.13-201ENST00000364804 214 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 Y_RNA.378-201ENST00000365652 113 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-546P-201ENST00000383991 107 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-611P-201ENST00000384276 104 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 Y_RNA.517-201ENST00000384551 106 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-780P-201ENST00000391030 104 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 SNORA26.3-201ENST00000391119 136 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 MIR1261-201ENST00000408659 82 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 MTND3P21-201ENST00000433774 331 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC003989.2-201ENST00000440224 169 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 MTCO2P3-201ENST00000442543 421 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC010095.1-201ENST00000443543 144 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC007677.1-201ENST00000445757 515 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 MTCO2P7-201ENST00000446518 666 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-1208P-201ENST00000459588 107 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RPL21P99-201ENST00000480369 423 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC104564.1-201ENST00000493028 407 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RPS29P11-201ENST00000496507 171 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-295P-201ENST00000516901 104 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-667P-201ENST00000517186 102 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC022616.8-201ENST00000533569 253 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 MIR4255-201ENST00000579351 72 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 MIR3136-201ENST00000583498 78 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AL158827.2-201ENST00000602494 330 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC092747.3-201ENST00000603769 301 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 SNRPGP17-201ENST00000603780 214 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AL034555.1-201ENST00000604816 211 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC005858.4-201ENST00000623191 700 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AL691447.3-201ENST00000635020 330 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AC068137.3-201ENST00000639191 341 ntBASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TRAPPC4Q9Y296 AL356292.1-201ENST00000283110 373 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-522P-201ENST00000364497 107 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 RNU4-66P-201ENST00000365199 138 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 HMGN2P39-201ENST00000398005 273 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 SNORA11.2-201ENST00000408318 127 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 MTCO3P41-201ENST00000414801 328 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 ARL5AP1-201ENST00000418991 388 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC078809.1-201ENST00000427601 140 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 CBX3P6-201ENST00000430257 527 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AL133396.1-201ENST00000432048 687 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 MTND3P16-201ENST00000452205 344 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 YWHAEP4-201ENST00000505390 198 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-1038P-201ENST00000516516 104 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC107953.1-201ENST00000522216 297 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AP005597.4-201ENST00000526762 229 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AK6P1-201ENST00000540219 478 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AL031274.2-201ENST00000599419 203 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC243960.4-201ENST00000600532 288 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AP001836.1-201ENST00000604675 523 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC092807.2-201ENST00000609367 243 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 MIR6845-201ENST00000613182 61 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC015540.1-201ENST00000615828 501 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 SNORD98-201ENST00000636377 67 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC099654.12-201ENST00000639868 649 ntBASIC1.57□□□□□ -2.16
TRAPPC4Q9Y296 AC121333.1-201ENST00000567488 2709 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 RNU4-15P-201ENST00000362613 141 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 Y_RNA.231-201ENST00000364358 102 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-142P-201ENST00000384019 107 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 SNORD73A-201ENST00000386062 65 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AL356432.1-201ENST00000405809 419 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-908P-201ENST00000410160 94 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 Y_RNA.597-201ENST00000410463 100 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 RNU6-1068P-201ENST00000410958 103 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AP000275.1-201ENST00000411943 390 ntBASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAPPC4Q9Y296 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms