Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 COX6CP10-201ENST00000416832 224 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC123900.1-201ENST00000420390 96 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 BNIP3P6-201ENST00000549284 499 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC008507.2-201ENST00000588402 1176 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 AC004492.1-201ENST00000607036 742 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 RMST_4.1-201ENST00000616886 107 ntBASIC0.54□□□□□ -2.32
SCN8AQ9UQD0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 AC099786.3-201ENST00000565735 1410 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 RNU1-96P-201ENST00000364163 162 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 RNU6-43P-201ENST00000384302 107 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 AL117342.1-201ENST00000404861 406 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 PRPS1P1-201ENST00000445305 876 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 RPS27AP8-201ENST00000452665 445 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 SNORA43.2-201ENST00000516652 128 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 RNA5SP503-201ENST00000517047 117 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 AC131235.4-201ENST00000609288 620 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 MIR8087-201ENST00000612745 78 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 OR4G3P-201ENST00000633500 913 ntBASIC0.53□□□□□ -2.32
SCN8AQ9UQD0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 RNU6-78P-201ENST00000362897 107 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 SNORD56.1-201ENST00000362913 68 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 Y_RNA.132-201ENST00000363421 102 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 RNU6-621P-201ENST00000364752 109 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 MIR544A-201ENST00000384855 91 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AL358794.1-201ENST00000445689 381 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 RPS26P45-201ENST00000471748 340 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AC004817.2-201ENST00000561794 651 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AC008147.4-201ENST00000617570 1204 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AC073343.1-201ENST00000328239 651 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 RNA5SP327-201ENST00000362494 101 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 SNORA4.1-201ENST00000364263 144 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 MIR10A-201ENST00000385043 110 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 RAP1BP3-201ENST00000407180 549 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 RNU2-39P-201ENST00000410604 198 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AC016925.1-201ENST00000458303 298 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AL139824.2-201ENST00000458731 1095 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 PSMC1P5-201ENST00000512850 177 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AC012507.3-201ENST00000603556 477 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AC012409.4-201ENST00000612923 249 ntBASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.52□□□□□ -2.33
SCN8AQ9UQD0 RNU6-505P-201ENST00000384427 107 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AL356776.1-201ENST00000406574 447 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 MTCO3P29-201ENST00000432119 779 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 TRBVA-201ENST00000498804 316 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AC090517.1-201ENST00000569307 266 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 MIR544B-201ENST00000582372 78 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AL606834.3-201ENST00000602615 496 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AL592221.1-201ENST00000605266 382 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AC106800.4-201ENST00000614905 153 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AL121895.2-201ENST00000619558 447 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 AL159152.1-201ENST00000635019 2587 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 ELL2P3-201ENST00000457883 1602 ntBASIC0.51□□□□□ -2.33
SCN8AQ9UQD0 Y_RNA.192-201ENST00000363977 102 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RNU6-1065P-201ENST00000384513 106 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 MIR515-2-201ENST00000384883 83 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 MIR515-1-201ENST00000384884 83 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RNA5SP201-201ENST00000410316 124 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RPL22P18-201ENST00000417197 377 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AC245047.7-201ENST00000440265 293 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AC243964.1-201ENST00000441814 261 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RNU7-51P-201ENST00000516560 62 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AC021231.3-201ENST00000558497 370 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 MTCO2P2-201ENST00000591258 225 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AC107304.1-201ENST00000604229 296 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 BX284668.6-201ENST00000606899 438 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AC144521.1-201ENST00000607148 956 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AC024940.5-201ENST00000622889 474 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 SNORD98-201ENST00000636377 67 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RNU4-15P-201ENST00000362613 141 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 SNORA63.3-201ENST00000362682 132 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 Y_RNA.115-201ENST00000363272 98 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 MIR625-201ENST00000385047 85 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AK3P2-201ENST00000507976 429 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RNU6-496P-201ENST00000516145 99 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RNU6-1146P-201ENST00000516282 102 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RNU6-567P-201ENST00000516746 107 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AP001893.2-201ENST00000526949 202 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 AC115990.1-201ENST00000526957 301 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 TMF1P1-201ENST00000576058 373 ntBASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SCN8AQ9UQD0 RNU6-960P-201ENST00000364056 120 ntBASIC0.49□□□□□ -2.33
SCN8AQ9UQD0 RNU2-64P-201ENST00000411315 191 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms