Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AL353746.1-201ENST00000566293 6881 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AL606537.1-201ENST00000607258 2011 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AC090740.1-201ENST00000623193 2262 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.226-201ENST00000364337 114 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 RNU6-1130P-201ENST00000365434 107 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 RPL21P40-201ENST00000428586 483 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AC091021.1-201ENST00000468051 388 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 SNORD116-28-201ENST00000516123 91 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 RNU6-1219P-201ENST00000516143 112 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.706-201ENST00000516933 99 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AC025755.1-201ENST00000521306 278 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AC079600.2-201ENST00000550076 130 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AL358913.1-201ENST00000554342 121 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AC025754.2-201ENST00000606491 432 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 MTND1P7-201ENST00000632801 297 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 PROS2P-201ENST00000474651 1951 ntBASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NOTCH3Q9UM47 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 RNU6-45P-201ENST00000384471 107 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 MIR521-1-201ENST00000384902 87 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 SNORA40C-201ENST00000391285 128 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 RNU6-607P-201ENST00000411283 108 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 CYCSP33-201ENST00000414485 327 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 MTND3P9-201ENST00000429526 346 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 HMGB1P27-201ENST00000431429 603 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC124916.1-201ENST00000444020 547 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC079354.2-201ENST00000453523 154 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC073901.1-201ENST00000462471 408 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC140059.1-201ENST00000489238 361 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 RNU6-313P-201ENST00000516317 112 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AL157871.3-201ENST00000557231 293 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 RPL23AP78-201ENST00000599928 470 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC123912.5-201ENST00000605470 343 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 SNORD113-5-201ENST00000607261 78 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AL008718.3-201ENST00000610217 321 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 MIR30E-201ENST00000362104 92 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 RNU6-1255P-201ENST00000363434 112 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.218-201ENST00000364218 104 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.353-201ENST00000365440 108 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.488-201ENST00000384403 102 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 SNORA12.2-201ENST00000391040 156 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 RNU2-21P-201ENST00000410368 188 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 RPS12P23-201ENST00000419579 400 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AL358453.1-201ENST00000422522 250 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC063976.3-201ENST00000426849 329 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC005912.1-201ENST00000495392 255 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC107934.2-201ENST00000518653 310 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AP005660.1-201ENST00000522972 293 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 AC005520.5-201ENST00000613926 164 ntBASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.24□□□□□ -2.05
NOTCH3Q9UM47 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 RNVU1-3-201ENST00000364313 161 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.435-201ENST00000384095 112 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 MIR578-201ENST00000384828 96 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AL138878.1-201ENST00000405131 347 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC005840.1-201ENST00000498412 377 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 VWA8P1-201ENST00000510889 176 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 SNORA72.7-201ENST00000516349 94 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 AC091895.1-201ENST00000624494 256 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 Z99571.1-201ENST00000636677 394 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 MIR4679-1-201ENST00000637619 75 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 RNA5SP391-201ENST00000363456 119 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 U3.6-201ENST00000363622 211 ntBASIC2.23□□□□□ -2.05
NOTCH3Q9UM47 Y_RNA.441-201ENST00000384123 112 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms