Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 EIF1P2-201ENST00000428233 350 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AC009969.1-201ENST00000438726 172 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AC112771.1-201ENST00000463581 102 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AC104027.1-201ENST00000521887 300 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AC093023.1-201ENST00000547375 507 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AC027288.2-201ENST00000553028 243 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AL034555.1-201ENST00000604816 211 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 AC110079.1-202ENST00000635213 138 ntBASIC3.9□□□□□ -1.79
DDX41Q9UJV9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
DDX41Q9UJV9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX41Q9UJV9 OR56A5-201ENST00000340110 738 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 RNU6-655P-201ENST00000362858 107 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 Y_RNA.458-201ENST00000384240 102 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 RNU1-57P-201ENST00000384491 166 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 ELOCP20-201ENST00000422460 345 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX41Q9UJV9 AC067942.3-201ENST00000512025 362 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 MIR2276-201ENST00000516886 89 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
DDX41Q9UJV9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.89□□□□□ -1.79
DDX41Q9UJV9 MYL12BP1-201ENST00000569826 507 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.89□□□□□ -1.79
DDX41Q9UJV9 MIR5695-201ENST00000579717 85 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 AL078605.1-201ENST00000603529 500 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 AL162713.1-201ENST00000604480 262 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 AC005000.2-201ENST00000605468 310 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 AC107294.3-201ENST00000609211 526 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 UCA1.1-201ENST00000620952 75 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 MIR8062-201ENST00000621515 85 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 U6.92-201ENST00000636464 89 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
DDX41Q9UJV9 AL359854.1-201ENST00000614203 1594 ntBASIC3.89□□□□□ -1.79
DDX41Q9UJV9 Y_RNA.19-201ENST00000362462 99 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 RNU6-1301P-201ENST00000362724 104 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 RNU6-26P-201ENST00000383985 107 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 MIR186-201ENST00000384988 86 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 RNU6-159P-201ENST00000391080 106 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 MIR208B-201ENST00000401172 77 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AC009414.1-201ENST00000427200 443 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 WARS2P1-201ENST00000429678 537 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AC096638.1-201ENST00000444678 216 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AC115115.1-201ENST00000449927 248 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 MTND4LP22-201ENST00000508209 276 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AC079598.5-201ENST00000547460 117 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 MIR4765-201ENST00000585007 77 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AL137843.1-201ENST00000605078 385 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 MIR7112-201ENST00000616126 65 ntBASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.88□□□□□ -1.79
DDX41Q9UJV9 AC091564.4-201ENST00000533934 2194 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX41Q9UJV9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.87□□□□□ -1.79
DDX41Q9UJV9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.87□□□□□ -1.79
DDX41Q9UJV9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.87□□□□□ -1.79
DDX41Q9UJV9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 RNU6-1083P-201ENST00000384022 107 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 U3.19-201ENST00000390893 196 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 RNU6-1093P-201ENST00000391194 107 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 MIR1302-6-201ENST00000408466 90 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 AC097463.2-201ENST00000421074 142 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 Z98742.2-201ENST00000431564 187 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.87□□□□□ -1.79
DDX41Q9UJV9 AC010469.2-201ENST00000496412 480 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 SNORA64.4-201ENST00000516632 81 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX41Q9UJV9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.87□□□□□ -1.79
DDX41Q9UJV9 AC010205.1-201ENST00000616668 449 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 AC022149.2-201ENST00000621061 203 ntBASIC3.87□□□□□ -1.79
DDX41Q9UJV9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
DDX41Q9UJV9 AC068647.1-201ENST00000489539 2265 ntBASIC3.86□□□□□ -1.79
DDX41Q9UJV9 RNA5SP383-201ENST00000362934 120 ntBASIC3.86□□□□□ -1.79
DDX41Q9UJV9 Y_RNA.111-201ENST00000363248 100 ntBASIC3.86□□□□□ -1.79
DDX41Q9UJV9 SNORD56.3-201ENST00000363507 71 ntBASIC3.86□□□□□ -1.79
DDX41Q9UJV9 CD24P4-201ENST00000382840 243 ntBASIC3.86□□□□□ -1.79
DDX41Q9UJV9 PCNPP5-201ENST00000452246 481 ntBASIC3.86□□□□□ -1.79
DDX41Q9UJV9 FCF1P8-201ENST00000510322 597 ntBASIC3.86□□□□□ -1.79
DDX41Q9UJV9 RNA5SP112-201ENST00000515937 99 ntBASIC3.86□□□□□ -1.79
DDX41Q9UJV9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX41Q9UJV9 AC026333.2-201ENST00000542164 106 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms