Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 U2.14-201ENST00000615943 113 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 ZYXP1-201ENST00000617638 118 ntBASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VTI1BQ9UEU0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
VTI1BQ9UEU0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.78□□□□□ -1.81
VTI1BQ9UEU0 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 RNU1-75P-201ENST00000347264 129 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 RNU6-1266P-201ENST00000362794 105 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 SNORD32B-201ENST00000364460 84 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 SNORA72.2-201ENST00000365028 127 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 RNU6-326P-201ENST00000365480 107 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.415-201ENST00000384012 112 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 RPL27AP5-201ENST00000469428 449 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AC140059.1-201ENST00000489238 361 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 HMGB3P17-201ENST00000504195 649 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AC055872.1-201ENST00000570978 278 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 RPL17P51-201ENST00000605218 238 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AC022441.3-201ENST00000605737 136 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 MIR6798-201ENST00000612887 67 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AC090517.3-201ENST00000625170 141 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AC068724.3-201ENST00000625906 87 ntBASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTI1BQ9UEU0 AC010329.5-201ENST00000623497 2174 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.331-201ENST00000365267 102 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 RNU6-213P-201ENST00000384051 104 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.539-201ENST00000384635 107 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 U8.12-201ENST00000384701 133 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 MIR199A2-201ENST00000385289 110 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 RPL21P65-201ENST00000406094 466 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 RPL23AP36-201ENST00000413895 458 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 AL117339.2-201ENST00000430475 180 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 AC146507.2-201ENST00000460608 476 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 AC108043.1-201ENST00000512696 574 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 RNU2-44P-201ENST00000516795 194 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 RNU2-31P-201ENST00000516954 155 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 AC037487.3-201ENST00000606668 112 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 AL590240.4-201ENST00000616908 390 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 MIR7157-201ENST00000635801 60 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 IGHVIII-44-202ENST00000636235 289 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 AC068205.3-201ENST00000636385 468 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 MIR7515-201ENST00000637837 67 ntBASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VTI1BQ9UEU0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 MIR410-201ENST00000362222 80 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 MIR372-201ENST00000362225 67 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.54-201ENST00000362766 105 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 RNU1-72P-201ENST00000362976 153 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 RNU6-1310P-201ENST00000384153 107 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 Y_RNA.569-201ENST00000384749 103 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 AL691449.1-201ENST00000426570 421 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 RPL30P4-201ENST00000429309 333 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 Z98949.2-201ENST00000440996 144 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 AC005042.3-201ENST00000453230 174 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 RN7SL330P-201ENST00000469709 307 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 YPEL5P3-201ENST00000547227 352 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 MIR3160-1-201ENST00000577972 85 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 AC091167.4-201ENST00000605079 184 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 BX284668.6-201ENST00000606899 438 ntBASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VTI1BQ9UEU0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 SNORA68.1-201ENST00000364537 132 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 RNA5SP283-201ENST00000365604 119 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 RNU6-1264P-201ENST00000383891 107 ntBASIC3.74□□□□□ -1.81
VTI1BQ9UEU0 SNORD58.1-201ENST00000391313 66 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms