Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-105P-201ENST00000363909 104 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RNU6-1026P-201ENST00000384465 108 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RNU6-910P-201ENST00000390844 107 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RPS20P2-201ENST00000402520 389 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 EEF1A1P40-201ENST00000412883 573 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RPL39P38-201ENST00000467018 153 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 TRBVA-201ENST00000498804 316 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RNA5SP384-201ENST00000516615 116 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RNU6-856P-201ENST00000516959 98 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 RNU6-201P-201ENST00000517100 61 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 HSPE1P4-201ENST00000550617 308 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 MIR4781-201ENST00000585250 76 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 AL353149.1-201ENST00000610667 244 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 AC126177.8-201ENST00000618339 1015 ntBASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.58□□□□□ -2.32
VPS29Q9UBQ0 AC009541.1-201ENST00000438279 2662 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 U3.9-201ENST00000363823 204 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RNU6-534P-201ENST00000364877 106 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 MIR520E-201ENST00000384867 87 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 SNORD12-201ENST00000391002 90 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RNA5SP201-201ENST00000410316 124 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RPS3AP1-201ENST00000413190 320 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RAB28P5-201ENST00000427490 651 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 AC243964.1-201ENST00000441814 261 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 Y_RNA.638-201ENST00000459374 113 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RNU6-322P-201ENST00000516010 103 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RNU6-276P-201ENST00000516114 96 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RN7SKP49-201ENST00000516675 260 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 RNU6-1003P-201ENST00000517099 105 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 AC010376.1-201ENST00000522101 334 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 AC004812.1-201ENST00000540773 146 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 AC025423.5-201ENST00000550230 219 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 MIR5697-201ENST00000578045 78 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 AL606834.3-201ENST00000602615 496 ntBASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
VPS29Q9UBQ0 Y_RNA.124-201ENST00000363339 93 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 RNU6-1141P-201ENST00000364520 107 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 SNORD114-22-201ENST00000365423 72 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 RNU6-877P-201ENST00000383868 107 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 RNU6-17P-201ENST00000384245 107 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 RNU6-43P-201ENST00000384302 107 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 RNU6-18P-201ENST00000384527 107 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 HIGD1AP15-201ENST00000416198 280 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 AC244670.1-201ENST00000436879 112 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 EEF1A1P39-201ENST00000440791 250 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 AL163973.1-201ENST00000484753 577 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 SNORA19.3-201ENST00000516165 130 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 SUMO2P16-201ENST00000519475 264 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 MIR5692A1-201ENST00000580523 69 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 MIR3124-201ENST00000582636 67 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 CTHRC1P1-201ENST00000605383 469 ntBASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
VPS29Q9UBQ0 RNU6-371P-201ENST00000364283 108 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 SNORA72.2-201ENST00000365028 127 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 MIR200A-201ENST00000384875 90 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 MIR605-201ENST00000385078 83 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 RNU2-72P-201ENST00000411175 163 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 RPS26P5-201ENST00000418544 335 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AC002429.1-201ENST00000437672 148 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 RAP1BP2-201ENST00000478270 544 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AC011406.1-201ENST00000512440 370 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AC022616.6-201ENST00000520479 119 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 MIR3923-201ENST00000579521 83 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 MTATP6P3-201ENST00000581686 676 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AL592221.1-201ENST00000605266 382 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AL021368.1-201ENST00000607490 540 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 MIR6504-201ENST00000613520 61 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AL157786.1-207ENST00000627771 695 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 AC006927.4-201ENST00000639187 543 ntBASIC0.55□□□□□ -2.32
VPS29Q9UBQ0 RNU1-76P-201ENST00000362903 159 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 SNORD56.2-201ENST00000363242 71 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 RNA5SP111-201ENST00000411386 101 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AC060773.1-201ENST00000421698 310 ntBASIC0.54□□□□□ -2.32
VPS29Q9UBQ0 AC010975.2-201ENST00000427781 588 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms