Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RPS4XP2-201ENST00000458402 793 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 RN7SL442P-201ENST00000473804 320 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 AC025518.1-201ENST00000479856 347 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-58P-201ENST00000517143 103 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 IGKV2-26-201ENST00000518305 343 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 AC012433.1-201ENST00000588916 398 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 AC091152.3-201ENST00000604227 325 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 AC058791.1-201ENST00000608412 3198 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 MAPK10-362ENST00000641864 4484 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.143-201ENST00000363520 106 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 RNA5SP50-201ENST00000363731 107 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.352-201ENST00000365439 102 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 U3.19-201ENST00000390893 196 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AC012306.1-201ENST00000423267 114 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AC098869.1-201ENST00000481627 292 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 FCF1P8-201ENST00000510322 597 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AC093331.1-201ENST00000521474 169 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AC019176.2-201ENST00000611579 315 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 AL513302.2-201ENST00000562313 1842 ntBASIC3.53□□□□□ -1.84
PPARGC1AQ9UBK2 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
PPARGC1AQ9UBK2 RNU1-75P-201ENST00000347264 129 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-281P-201ENST00000384212 103 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 MIR183-201ENST00000384958 110 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 MIR670-201ENST00000390142 98 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 SNRPGP7-201ENST00000469016 106 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 AC105137.2-201ENST00000569073 466 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 AL356575.1-201ENST00000603008 283 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 AC005296.1-201ENST00000616145 209 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 AL079305.1-201ENST00000623159 3008 ntBASIC3.52□□□□□ -1.85
PPARGC1AQ9UBK2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 RNU1-33P-201ENST00000364249 162 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 RNU4-56P-201ENST00000364700 142 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 MIR7-3-201ENST00000384898 110 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 SNORD12B-201ENST00000410433 91 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 RNU2-64P-201ENST00000411315 191 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 RPL23AP67-201ENST00000465341 474 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AC093663.1-201ENST00000497190 394 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-1338P-201ENST00000516328 91 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 AC073410.2-201ENST00000603240 332 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 U6.105-201ENST00000637379 88 ntBASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.51□□□□□ -1.85
PPARGC1AQ9UBK2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AC017071.1-201ENST00000564407 2204 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-1010P-201ENST00000362757 107 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RNU4-90P-201ENST00000362773 141 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 Y_RNA.237-201ENST00000364439 102 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-1145P-201ENST00000384246 107 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 MIR23B-201ENST00000384832 97 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 MIR215-201ENST00000384858 110 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 MIR490-201ENST00000384865 128 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RNU6-750P-201ENST00000390946 107 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RNA5SP171-201ENST00000391071 115 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 SNORD58.1-201ENST00000391313 66 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RNU5A-5P-201ENST00000411054 116 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AL358232.1-201ENST00000448030 501 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 CYCSP35-201ENST00000451978 304 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RPS29P12-201ENST00000460178 152 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AC007215.1-201ENST00000464893 276 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RPL30P12-201ENST00000474666 353 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 CYCSP23-201ENST00000519781 313 ntBASIC3.5□□□□□ -1.85
PPARGC1AQ9UBK2 AK6P2-201ENST00000549020 471 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms