Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU6-784P-201ENST00000384330 106 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 Y_RNA.482-201ENST00000384377 111 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.55□□□□□ -2
HCN3Q9P1Z3 AL356057.3-201ENST00000402607 340 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.55□□□□□ -2
HCN3Q9P1Z3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.55□□□□□ -2
HCN3Q9P1Z3 RN7SL297P-201ENST00000483161 293 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 AC021146.2-201ENST00000504736 556 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.55□□□□□ -2
HCN3Q9P1Z3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.55□□□□□ -2
HCN3Q9P1Z3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
HCN3Q9P1Z3 MIR3923-201ENST00000579521 83 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 FGF7P1-201ENST00000582820 288 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 AL078605.1-201ENST00000603529 500 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 Z98751.3-201ENST00000604447 521 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 AC016727.1-205ENST00000605437 569 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 PISRT1.1-201ENST00000616930 107 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 AC069528.2-201ENST00000624849 1991 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 AL450472.1-202ENST00000637286 180 ntBASIC2.55□□□□□ -2
HCN3Q9P1Z3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HCN3Q9P1Z3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC062016.1-201ENST00000355719 319 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 RNU4-15P-201ENST00000362613 141 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 RNU6-859P-201ENST00000362728 107 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 SNORD50.1-201ENST00000362987 71 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 RNU6-593P-201ENST00000364716 112 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 RNU1-109P-201ENST00000383960 147 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 RNU6-1050P-201ENST00000410388 107 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 RNA5SP494-201ENST00000410653 129 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 RNU4-14P-201ENST00000410858 122 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC108938.1-201ENST00000451204 136 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 snoU13.6-201ENST00000458785 104 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC026782.1-201ENST00000512952 449 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 RNU6-567P-201ENST00000516746 107 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 HSPE1P18-201ENST00000517602 280 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC018462.2-201ENST00000605375 395 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 AC025253.1-201ENST00000613623 543 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 AL008636.1-201ENST00000625038 1018 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
HCN3Q9P1Z3 MTND5P9-201ENST00000503854 1755 ntBASIC2.54□□□□□ -2
HCN3Q9P1Z3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
HCN3Q9P1Z3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
HCN3Q9P1Z3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HCN3Q9P1Z3 RNU6-1286P-201ENST00000383871 107 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 MIR196B-201ENST00000384852 84 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 SNORA26.3-201ENST00000391119 136 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 MIR208B-201ENST00000401172 77 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 AL591034.2-201ENST00000402839 359 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 Y_RNA.594-201ENST00000410373 140 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 RNA5SP184-201ENST00000411071 108 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 AC012306.1-201ENST00000423267 114 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 AL513124.1-201ENST00000450410 614 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 SNORD5.1-201ENST00000458800 75 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.53□□□□□ -2
HCN3Q9P1Z3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 Y_RNA.708-201ENST00000516950 96 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.53□□□□□ -2
HCN3Q9P1Z3 MIR3945-201ENST00000581853 98 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 MIR4635-201ENST00000583759 79 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 RPL23AP88-201ENST00000605759 454 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 AC009229.3-201ENST00000608056 282 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 AC009318.2-201ENST00000610917 651 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 MIR6715A-201ENST00000615929 79 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 AL359757.2-201ENST00000624309 274 ntBASIC2.53□□□□□ -2
HCN3Q9P1Z3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
HCN3Q9P1Z3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.53□□□□□ -2
HCN3Q9P1Z3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 MIR449A-201ENST00000362113 91 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 RNA5SP432-201ENST00000362480 116 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 Y_RNA.48-201ENST00000362710 103 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 RNU1-23P-201ENST00000363361 144 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 RNU6-944P-201ENST00000364023 107 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 RNU6-842P-201ENST00000384269 107 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 SNORA12-201ENST00000391162 147 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 RNU6-370P-201ENST00000411008 104 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 RNU6-1304P-201ENST00000411374 106 ntBASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.52□□□□□ -2.01
HCN3Q9P1Z3 RPL7P42-201ENST00000481005 679 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms